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2ZDL

Exploring trypsin S3 pocket

Functional Information from GO Data
ChainGOidnamespacecontents
A0004175molecular_functionendopeptidase activity
A0004252molecular_functionserine-type endopeptidase activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0006508biological_processproteolysis
A0007586biological_processdigestion
A0008236molecular_functionserine-type peptidase activity
A0046872molecular_functionmetal ion binding
A0097180cellular_componentserine protease inhibitor complex
A0097655molecular_functionserpin family protein binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 601
ChainResidue
AGLU70
AASN72
AVAL75
AGLU80
AHOH1013
AHOH1017

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 701
ChainResidue
AHOH1021
AHOH1096
ALYS87
ALYS107
ATHR149

site_idAC3
Number of Residues19
DetailsBINDING SITE FOR RESIDUE 45U A 501
ChainResidue
AHIS57
AASN97
ATHR98
ALEU99
ACYS128
AALA129
AASP189
ASER190
ACYS191
AGLN192
ASER195
ASER214
ATRP215
AGLY216
AGLY219
ACYS220
AGLY226
AHOH1025
AHOH1085

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 901
ChainResidue
AARG66
AILE73
AASN74
AVAL76
AVAL90
AHIS91
APRO92
ATYR94
AHOH1017
AHOH1092

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 902
ChainResidue
AASN48
ALEU123
ALYS239
AHOH1036

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 903
ChainResidue
AALA129
AILE162
ALEU163
AASP165
APHE181
ALYS230
AHOH1042
AHOH1089

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. VSAAHC
ChainResidueDetails
AVAL53-CYS58

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DScqGDSGGPVV
ChainResidueDetails
AASP189-VAL200

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: Charge relay system
ChainResidueDetails
ALYS60
ALEU105
APRO198

site_idSWS_FT_FI2
Number of Residues7
DetailsBINDING:
ChainResidueDetails
AILE73
AVAL75
AGLY78
AILE83
AGLN192
ASER195
APRO198

220113

PDB entries from 2024-05-22

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