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2XDC

Structure of linear gramicidin D obtained using Type I crystals grown in a lipid cubic phase.

Functional Information from PDB Data
site_idAC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE 15P A 1016
ChainResidue
ATRP15
ETRP15
AETA16
A15P1017
ANA1018
BDLE4
CDLE4
DTRP15
DETA16
EDLE14

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE 15P A 1017
ChainResidue
A15P1016
ANA1018
BFVA1
DTRP15
DETA16

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA A 1018
ChainResidue
A15P1016
A15P1017
DTRP15

site_idAC4
Number of Residues17
DetailsBINDING SITE FOR RESIDUE 15P B 1016
ChainResidue
ATRP9
ADLE10
ATRP11
BTRP9
BDLE10
BTRP11
CTRP9
CTRP13
C15P1016
DDLE10
DTRP11
DTRP15
ETRP9
ETRP13
FDLE10
FTRP11
FTRP15

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE 15P C 1016
ChainResidue
B15P1016
CDVA8
CTRP13

site_idAC6
Number of Residues24
DetailsBINDING SITE FOR CHAIN A OF GRAMICIDIN A
ChainResidue
A15P1016
BFVA1
BGLY2
BALA3
BDLE4
BALA5
BDVA6
BVAL7
BDVA8
BTRP9
BDLE10
BTRP11
BDLE12
BTRP13
BDLE14
BTRP15
BETA16
B15P1016
CALA5
CTRP13
DGLY2
EALA5
FALA3
FDVA8

site_idAC7
Number of Residues26
DetailsBINDING SITE FOR CHAIN B OF GRAMICIDIN A
ChainResidue
AFVA1
AGLY2
AALA3
ADLE4
AALA5
ADVA6
AVAL7
ADVA8
ATRP9
ADLE10
ATRP11
ADLE12
ATRP13
ADLE14
ATRP15
AETA16
A15P1016
A15P1017
B15P1016
CALA5
DALA3
DDVA8
EALA5
ETRP13
FGLY2
FTRP11

site_idAC8
Number of Residues24
DetailsBINDING SITE FOR CHAIN C OF GRAMICIDIN A
ChainResidue
DALA5
DDVA6
DVAL7
DDVA8
DTRP9
DDLE10
DTRP11
DDLE12
DTRP13
DDLE14
DTRP15
DETA16
FTRP11
AALA3
ATRP11
A15P1016
BDLE4
B15P1016
B15P1016
C15P1016
DFVA1
DGLY2
DALA3
DDLE4

site_idAC9
Number of Residues23
DetailsBINDING SITE FOR CHAIN D OF GRAMICIDIN A
ChainResidue
AGLY2
A15P1016
A15P1017
ANA1018
BDLE12
BTRP13
B15P1016
CGLY2
CALA3
CDLE4
CALA5
CDVA6
CVAL7
CDVA8
CTRP9
CDLE10
CTRP11
CDLE12
CTRP13
CDLE14
CTRP15
CETA16
ETRP9

site_idBC1
Number of Residues25
DetailsBINDING SITE FOR CHAIN E OF GRAMICIDIN A
ChainResidue
ADLE4
A15P1016
A15P1016
BALA3
BTRP11
B15P1016
B15P1016
DTRP11
EHOH2001
EHOH2002
FFVA1
FALA3
FDLE4
FALA5
FDVA6
FVAL7
FDVA8
FTRP9
FDLE10
FTRP11
FDLE12
FTRP13
FDLE14
FTRP15
FETA16

site_idBC2
Number of Residues22
DetailsBINDING SITE FOR CHAIN F OF GRAMICIDIN A
ChainResidue
ADLE12
ATRP13
BGLY2
BTRP11
B15P1016
CTRP9
EGLY2
EALA3
EDLE4
EALA5
EDVA6
EVAL7
EDVA8
ETRP9
EDLE10
ETRP11
EDLE12
ETRP13
EDLE14
ETRP15
EETA16
EHOH2001

219869

PDB entries from 2024-05-15

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