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2TDT

COMPLEX OF TETRAHYDRODIPICOLINATE N-SUCCINYLTRANSFERASE WITH 2-AMINOPIMELATE AND COENZYME A

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0008666molecular_function2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity
A0009085biological_processlysine biosynthetic process
A0009089biological_processlysine biosynthetic process via diaminopimelate
A0016740molecular_functiontransferase activity
A0016746molecular_functionacyltransferase activity
A0016779molecular_functionnucleotidyltransferase activity
A0019877biological_processdiaminopimelate biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues22
DetailsBINDING SITE FOR RESIDUE COA A 280
ChainResidue
AASP141
AARG213
AARG217
ATYR248
AVAL253
ALYS254
ALYS259
ATHR260
ALYS263
AHOH334
AHOH338
ASER159
AHOH350
AHOH352
AHOH383
AGLY160
AGLY185
AALA186
AGLU192
ASER203
AMET204
ASER211

site_idAC2
Number of Residues13
DetailsBINDING SITE FOR RESIDUE NPI A 281
ChainResidue
APHE67
AARG104
AARG112
AASN129
AMET139
AASP141
ASER148
AGLY166
AVAL167
ALEU168
AGLU169
AHOH325
AHOH383

Functional Information from PROSITE/UniProt
site_idPS00101
Number of Residues29
DetailsHEXAPEP_TRANSFERASES Hexapeptide-repeat containing-transferases signature. VDegTmVdtwAtVGscAqIGknVhLsggV
ChainResidueDetails
AVAL134-VAL162

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING:
ChainResidueDetails
AARG104
AASP141

Catalytic Information from CSA
site_idCSA1
Number of Residues3
Detailsa catalytic site defined by CSA, PubMed 9671504, 11910040
ChainResidueDetails
AGLY166
AGLU169
AASP141

site_idMCSA1
Number of Residues3
DetailsM-CSA 932
ChainResidueDetails
AASP141covalent catalysis
AGLY166electrostatic stabiliser
AGLU189proton shuttle (general acid/base)

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PDB entries from 2024-05-01

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