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2PVZ

Crystal structure of methylaconitate isomerase PrpF from Shewanella oneidensis

Functional Information from GO Data
ChainGOidnamespacecontents
A0016853molecular_functionisomerase activity
A0016863molecular_functionintramolecular oxidoreductase activity, transposing C=C bonds
A0019629biological_processpropionate catabolic process, 2-methylcitrate cycle
B0016853molecular_functionisomerase activity
B0016863molecular_functionintramolecular oxidoreductase activity, transposing C=C bonds
B0019629biological_processpropionate catabolic process, 2-methylcitrate cycle
Functional Information from PDB Data
site_idAC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CA A 1001
ChainResidue
AGLN240
BLYS59

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CA A 1002
ChainResidue
ALYS59
BGLN240

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 1003
ChainResidue
ASER69
ALYS73
ASER312
AHIS317

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 1004
ChainResidue
AGLN30
AHOH1186
AHOH1364
ALEU29

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 1005
ChainResidue
ASER22
ACSD107
AGLY108
AASN109
AMET321
AGLY322
ATHR323

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 1007
ChainResidue
AALA13
AALA14
ATHR15
APHE117
AASN121
AHOH1081
AHOH1090
AHOH1360

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1010
ChainResidue
APRO184
AASN219
AGLY221
AHOH1085

site_idAC8
Number of Residues11
DetailsBINDING SITE FOR RESIDUE EDO A 1011
ChainResidue
ALEU250
APHE253
AGLU254
AARG257
AILE282
ALEU311
AMET313
AGLY314
AHOH1111
AHOH1113
AHOH1123

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: Proton donor/acceptor => ECO:0000305|PubMed:17567742
ChainResidueDetails
ACSD107
AMET321
BCSD107
BMET321

site_idSWS_FT_FI2
Number of Residues14
DetailsBINDING: BINDING => ECO:0000269|PubMed:17567742
ChainResidueDetails
ASER22
BLYS281
BSER312
BHIS317
BGLY322
ASER69
AASN109
ALYS281
ASER312
AHIS317
AGLY322
BSER22
BSER69
BASN109

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Cysteine sulfinic acid (-SO2H) => ECO:0000269|PubMed:17567742
ChainResidueDetails
ACSD107
BCSD107

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PDB entries from 2024-06-12

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