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2PBK

Crystal structure of KSHV protease in complex with hexapeptide phosphonate inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0004252molecular_functionserine-type endopeptidase activity
A0006508biological_processproteolysis
B0004252molecular_functionserine-type endopeptidase activity
B0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE ACT A 601
ChainResidue
AASP12
AVAL14
ALEU25
APRO27
AGLN60
AGLY64
AILE65
AHOH643

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT A 602
ChainResidue
APRO101
ALEU102
ALEU103
AHIS152
AGLU100

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT B 603
ChainResidue
BPRO39
BSER185
BHOH813
BHOH819

site_idAC4
Number of Residues27
DetailsBINDING SITE FOR CHAIN C OF HEXAPEPTIDE PHOSPHONATE INHIBITOR
ChainResidue
BGLU22
BHIS46
BSER114
BLEU115
BSER116
BSER117
BILE118
BHIS119
BARG121
BGLU122
BSER128
BGLY129
BPRO130
BGLN133
BGLY141
BARG142
BARG143
BHOH654
CHOH8
CHOH9
CHOH10
CHOH11
CHOH12
CHOH13
CHOH14
CHOH15
CHOH17

site_idAC5
Number of Residues21
DetailsBINDING SITE FOR CHAIN D OF HEXAPEPTIDE PHOSPHONATE INHIBITOR
ChainResidue
AGLU22
AHIS46
ASER114
ALEU115
ASER116
ASER117
AILE118
AHIS119
AGLU122
APRO130
AGLY141
AARG142
AARG143
AHOH606
AHOH754
DHOH8
DHOH9
DHOH10
DHOH11
DHOH12
DHOH13

221051

PDB entries from 2024-06-12

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