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2O4S

Crystal Structure of HIV-1 Protease (Q7K) in Complex with Lopinavir

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 402
ChainResidue
BTHR74
BASN88
BHOH446

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 403
ChainResidue
BTRP6
BGOL407
BHOH488

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL B 404
ChainResidue
BHOH486
BHOH513
BTHR4
BTRP6
BLYS7

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 405
ChainResidue
ATHR74
AASN88
AHOH463
BARG41

site_idAC5
Number of Residues32
DetailsBINDING SITE FOR RESIDUE AB1 A 400
ChainResidue
AASP25
AGLY27
AALA28
AASP29
AASP30
AVAL32
AGLY48
AGLY49
AILE50
APRO81
AVAL82
AILE84
AHOH412
AHOH417
AHOH419
AHOH452
AHOH549
BASP25
BGLY27
BALA28
BASP29
BASP30
BVAL32
BILE47
BGLY48
BGLY49
BILE50
BPRO81
BVAL82
BHOH410
BHOH457
BHOH461

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B 406
ChainResidue
AGLN18
AMET36
ASER37
BTHR12
BGLU65
BCYS67
BGLY68

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 407
ChainResidue
AHOH455
BLYS55
BARG57
BCL403
BHOH549

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ALLDTGADDTVL
ChainResidueDetails
AALA22-LEU33

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: For protease activity; shared with dimeric partner => ECO:0000255|PROSITE-ProRule:PRU10094
ChainResidueDetails
ATHR26
BTHR26

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Cleavage; by viral protease => ECO:0000250
ChainResidueDetails
APRO1
BPRO1

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PDB entries from 2024-06-12

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