2NPI
Clp1-ATP-Pcf11 complex
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003723 | molecular_function | RNA binding |
A | 0005515 | molecular_function | protein binding |
A | 0005524 | molecular_function | ATP binding |
A | 0005634 | cellular_component | nucleus |
A | 0005849 | cellular_component | mRNA cleavage factor complex |
A | 0006388 | biological_process | tRNA splicing, via endonucleolytic cleavage and ligation |
A | 0006396 | biological_process | RNA processing |
A | 0006397 | biological_process | mRNA processing |
A | 0031124 | biological_process | mRNA 3'-end processing |
A | 0051731 | molecular_function | polynucleotide 5'-hydroxyl-kinase activity |
B | 0003723 | molecular_function | RNA binding |
B | 0005515 | molecular_function | protein binding |
B | 0005524 | molecular_function | ATP binding |
B | 0005634 | cellular_component | nucleus |
B | 0005849 | cellular_component | mRNA cleavage factor complex |
B | 0006388 | biological_process | tRNA splicing, via endonucleolytic cleavage and ligation |
B | 0006396 | biological_process | RNA processing |
B | 0006397 | biological_process | mRNA processing |
B | 0031124 | biological_process | mRNA 3'-end processing |
B | 0051731 | molecular_function | polynucleotide 5'-hydroxyl-kinase activity |
C | 0005849 | cellular_component | mRNA cleavage factor complex |
C | 0006369 | biological_process | termination of RNA polymerase II transcription |
C | 0031124 | biological_process | mRNA 3'-end processing |
D | 0005849 | cellular_component | mRNA cleavage factor complex |
D | 0006369 | biological_process | termination of RNA polymerase II transcription |
D | 0031124 | biological_process | mRNA 3'-end processing |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG B 2500 |
Chain | Residue |
B | THR137 |
B | ASP251 |
B | ATP1600 |
B | HOH2506 |
site_id | AC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG A 1500 |
Chain | Residue |
A | THR137 |
A | ATP600 |
site_id | AC3 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE ATP A 600 |
Chain | Residue |
A | LYS72 |
A | PRO74 |
A | GLN133 |
A | THR134 |
A | GLY135 |
A | LYS136 |
A | THR137 |
A | SER138 |
A | ASP311 |
A | GLY312 |
A | VAL313 |
A | SER314 |
A | VAL316 |
A | MG1500 |
A | ASP33 |
A | GLN35 |
A | PHE56 |
site_id | AC4 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE ATP B 1600 |
Chain | Residue |
B | ASP33 |
B | GLN35 |
B | PHE56 |
B | LYS72 |
B | PRO74 |
B | GLN133 |
B | THR134 |
B | GLY135 |
B | LYS136 |
B | THR137 |
B | SER138 |
B | SER254 |
B | ASP311 |
B | GLY312 |
B | SER314 |
B | LYS321 |
B | MG2500 |
B | HOH2506 |
Functional Information from PROSITE/UniProt
site_id | PS00430 |
Number of Residues | 115 |
Details | TONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mgsshhhhhhsqdpnsaslpgidehttseelitgdnewhklvipkgsdwqidlkaegklivkvnsgiveifgtelavddeytfqnwkfpiyaveetellwkcpdltt........NTITVKPN |
Chain | Residue | Details |
A | MSE-14-ASN100 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 6 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_03035, ECO:0000269|PubMed:17151076 |
Chain | Residue | Details |
A | GLN133 | |
B | ASP33 | |
B | LYS72 | |
B | GLN133 | |
A | ASP33 | |
A | LYS72 |