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Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

2MH5

Structure and NMR assignments of lantibiotic NAI-107 in DPC micelles

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005102	molecular_function	signaling receptor binding
A	0031640	biological_process	killing of cells of another organism
A	0042742	biological_process	defense response to bacterium

Functional Information from PDB Data

site_id	AC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 101

Chain	Residue
A	DPV102
A	DPV103
A	DPV151

site_id	AC2
Number of Residues	1
Details	BINDING SITE FOR RESIDUE DPV A 102

Chain	Residue
A	DPV101

site_id	AC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 103

Chain	Residue
A	DPV101
A	DPV115
A	DPV130

site_id	AC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DPV A 104

Chain	Residue
A	DPV132
A	DPV163
A	DPV119
A	DPV131

site_id	AC5
Number of Residues	1
Details	BINDING SITE FOR RESIDUE DPV A 105

Chain	Residue
A	DPV121

site_id	AC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 106

Chain	Residue
A	5CW4
A	DPV153

site_id	AC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 107

Chain	Residue
A	DPV109
A	DPV134
A	DPV145

site_id	AC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 108

Chain	Residue
A	DPV110
A	DPV122
A	DPV123

site_id	AC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 109

Chain	Residue
A	DPV107
A	DPV135
A	DPV145

site_id	BC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DPV A 110

Chain	Residue
A	DPV108
A	DPV123
A	DPV136
A	DPV164

site_id	BC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DPV A 111

Chain	Residue
A	LEU6
A	DBB8
A	DPV125
A	DPV155

site_id	BC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 112

Chain	Residue
A	DPV128
A	DPV158

site_id	BC4
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 113

Chain	Residue
A	DPV126
A	DPV128

site_id	BC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 114

Chain	Residue
A	DPV127
A	DPV147
A	DPV148

site_id	BC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE DPV A 115

Chain	Residue
A	DPV103
A	DPV116
A	DPV130
A	DPV142
A	DPV161

site_id	BC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 116

Chain	Residue
A	DPV115
A	DPV117
A	DPV161

site_id	BC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE DPV A 117

Chain	Residue
A	DPV116
A	DPV141
A	DPV147
A	DPV149
A	DPV161

site_id	BC9
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 119

Chain	Residue
A	DPV104
A	DPV132

site_id	CC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DPV A 120

Chain	Residue
A	DPV121
A	DPV133
A	DPV143
A	DPV144

site_id	CC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 121

Chain	Residue
A	DPV105
A	DPV120

site_id	CC3
Number of Residues	1
Details	BINDING SITE FOR RESIDUE DPV A 122

Chain	Residue
A	DPV108

site_id	CC4
Number of Residues	5
Details	BINDING SITE FOR RESIDUE DPV A 123

Chain	Residue
A	DPV108
A	DPV110
A	DPV126
A	DPV146
A	DPV164

site_id	CC5
Number of Residues	1
Details	BINDING SITE FOR RESIDUE DPV A 124

Chain	Residue
A	DPV158

site_id	CC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE DPV A 125

Chain	Residue
A	GLY10
A	DPV111
A	DPV137
A	DPV138
A	DPV164

site_id	CC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 126

Chain	Residue
A	DPV113
A	DPV123
A	DPV148

site_id	CC8
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DPV A 127

Chain	Residue
A	DPV114
A	DPV141
A	DPV142
A	DPV151

site_id	CC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 128

Chain	Residue
A	DPV112
A	DPV113
A	DPV129

site_id	DC1
Number of Residues	1
Details	BINDING SITE FOR RESIDUE DPV A 129

Chain	Residue
A	DPV128

site_id	DC2
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 130

Chain	Residue
A	DPV103
A	DPV115
A	DPV131

site_id	DC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 131

Chain	Residue
A	DPV104
A	DPV130

site_id	DC4
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 132

Chain	Residue
A	DPV104
A	DPV119

site_id	DC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 133

Chain	Residue
A	DPV120
A	DPV144
A	DPV159

site_id	DC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 134

Chain	Residue
A	DPV107
A	DPV135
A	DPV154

site_id	DC7
Number of Residues	5
Details	BINDING SITE FOR RESIDUE DPV A 135

Chain	Residue
A	DPV156
A	DPV109
A	DPV134
A	DPV145
A	DPV155

site_id	DC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 136

Chain	Residue
A	DPV110
A	DPV145
A	DPV164

site_id	DC9
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 137

Chain	Residue
A	DPV125
A	DPV138

site_id	EC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE DPV A 138

Chain	Residue
A	DPV125
A	DPV137
A	DPV157
A	DPV158
A	DPV162

site_id	EC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 139

Chain	Residue
A	DPV157
A	DPV162

site_id	EC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 140

Chain	Residue
A	5CW4
A	DPV152
A	DPV153

site_id	EC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DPV A 141

Chain	Residue
A	DPV117
A	DPV127
A	DPV142
A	DPV161

site_id	EC5
Number of Residues	5
Details	BINDING SITE FOR RESIDUE DPV A 142

Chain	Residue
A	DPV115
A	DPV127
A	DPV141
A	DPV160
A	DPV161

site_id	EC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 143

Chain	Residue
A	DPV120
A	DPV144

site_id	EC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 144

Chain	Residue
A	DPV120
A	DPV133
A	DPV143

site_id	EC8
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DPV A 145

Chain	Residue
A	DPV107
A	DPV109
A	DPV135
A	DPV136

site_id	EC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 146

Chain	Residue
A	DPV123
A	DPV160
A	DPV165

site_id	FC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 147

Chain	Residue
A	DPV114
A	DPV117

site_id	FC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 148

Chain	Residue
A	DPV114
A	DPV126

site_id	FC3
Number of Residues	1
Details	BINDING SITE FOR RESIDUE DPV A 149

Chain	Residue
A	DPV117

site_id	FC4
Number of Residues	1
Details	BINDING SITE FOR RESIDUE DPV A 150

Chain	Residue
A	DPV162

site_id	FC5
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 151

Chain	Residue
A	DPV101
A	DPV127

site_id	FC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 152

Chain	Residue
A	DPV140
A	DPV153

site_id	FC7
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DPV A 153

Chain	Residue
A	5CW4
A	DPV106
A	DPV140
A	DPV152

site_id	FC8
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 154

Chain	Residue
A	VAL1
A	DPV134

site_id	FC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 155

Chain	Residue
A	DPV111
A	DPV135
A	DPV156

site_id	GC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 156

Chain	Residue
A	DPV135
A	DPV155

site_id	GC2
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 157

Chain	Residue
A	DPV138
A	DPV139
A	DPV162

site_id	GC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 158

Chain	Residue
A	DPV112
A	DPV124
A	DPV138

site_id	GC4
Number of Residues	1
Details	BINDING SITE FOR RESIDUE DPV A 159

Chain	Residue
A	DPV133

site_id	GC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DPV A 160

Chain	Residue
A	DPV142
A	DPV146
A	DPV165

site_id	GC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE DPV A 161

Chain	Residue
A	DPV115
A	DPV116
A	DPV117
A	DPV141
A	DPV142

site_id	GC7
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DPV A 162

Chain	Residue
A	DPV138
A	DPV139
A	DPV150
A	DPV157

site_id	GC8
Number of Residues	1
Details	BINDING SITE FOR RESIDUE DPV A 163

Chain	Residue
A	DPV104

site_id	GC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DPV A 164

Chain	Residue
A	DPV110
A	DPV123
A	DPV125
A	DPV136

site_id	HC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE DPV A 165

Chain	Residue
A	DPV146
A	DPV160

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1
Details	MOD_RES: (E)-2,3-didehydrobutyrine => ECO:0000269\|Ref.1

Chain	Residue	Details
A	DBU2

site_id	SWS_FT_FI2
Number of Residues	1
Details	MOD_RES: 6'-chlorotryptophan => ECO:0000269\|Ref.1

Chain	Residue	Details
A	5CW4

site_id	SWS_FT_FI3
Number of Residues	1
Details	MOD_RES: 2,3-didehydroalanine (Ser) => ECO:0000269\|Ref.1

Chain	Residue	Details
A	DHA5

site_id	SWS_FT_FI4
Number of Residues	1
Details	MOD_RES: 4-hydroxyproline; in form A2 => ECO:0000269\|Ref.1

Chain	Residue	Details
A	HYP14

site_id	SWS_FT_FI5
Number of Residues	6
Details	CROSSLNK: Lanthionine (Ser-Cys) => ECO:0000269\|Ref.1

Chain	Residue	Details
A	CYS20
A	DAL18
A	CYS23
A	DAL3
A	CYS7
A	DAL13

site_id	SWS_FT_FI6
Number of Residues	2
Details	CROSSLNK: Beta-methyllanthionine (Thr-Cys) => ECO:0000269\|Ref.1

Chain	Residue	Details
A	CYS11
A	DBB8

site_id	SWS_FT_FI7
Number of Residues	2
Details	CROSSLNK: S-(2-aminovinyl)-D-cysteine (Ser-Cys) => ECO:0000269\|Ref.1

Chain	Residue	Details
A	TEE24
A	DAL21

219869

PDB entries from 2024-05-15

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