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2JEJ

The Molecular Basis of Selectivity of Nucleoside Triphosphate Incorporation Opposite O6-Benzylguanine by Sulfolobus solfataricus DNA Polymerase IV: Steady-state and Pre-steady-state Kinetics and X- Ray Crystallography of Correct and Incorrect Pairing

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003677molecular_functionDNA binding
A0003684molecular_functiondamaged DNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0006281biological_processDNA repair
A0006974biological_processDNA damage response
A0009432biological_processSOS response
A0016740molecular_functiontransferase activity
A0016779molecular_functionnucleotidyltransferase activity
A0042276biological_processerror-prone translesion synthesis
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA A1343
ChainResidue
AASP7
AASP105
AGLU106
ACA1344
ADGT1346
PDG15
PHOH2019

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A1344
ChainResidue
AASP105
ACA1343
ADGT1346
AASP7
APHE8

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A1345
ChainResidue
AALA181
AILE186
PHOH2004
PHOH2016
PHOH2017

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA P1016
ChainResidue
ADGT1346
AHOH2128
AHOH2130
PDC13
PDC14
PDG15
PHOH2021

site_idAC5
Number of Residues24
DetailsBINDING SITE FOR RESIDUE DGT A1346
ChainResidue
AASP7
APHE8
AASP9
ATYR10
APHE11
ATYR12
AALA44
ATHR45
ATYR48
AARG51
AASP105
ALYS159
ACA1343
ACA1344
AHOH2011
AHOH2129
AHOH2130
AHOH2131
AHOH2132
AHOH2133
PDC14
PDG15
PCA1016
TDC4

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE:
ChainResidueDetails
AGLU106

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING:
ChainResidueDetails
AASP7
AASP105

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Substrate discrimination
ChainResidueDetails
ATYR12

218853

PDB entries from 2024-04-24

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