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2G09

X-ray structure of mouse pyrimidine 5'-nucleotidase type 1, product complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0005737cellular_componentcytoplasm
A0008253molecular_function5'-nucleotidase activity
B0000287molecular_functionmagnesium ion binding
B0005737cellular_componentcytoplasm
B0008253molecular_function5'-nucleotidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 901
ChainResidue
AASP49
AASP51
AASP238
APO4903
AHOH1119
AHOH1254

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 902
ChainResidue
BPO4904
BHOH1265
BHOH1309
BASP49
BASP51
BASP238

site_idAC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE PO4 A 903
ChainResidue
AASP49
APHE50
AASP51
ASER164
AALA165
AGLY166
ALYS213
AMG901
AHOH930
AHOH1046

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE PO4 B 904
ChainResidue
BASP49
BPHE50
BASP51
BSER164
BALA165
BGLY166
BLYS213
BMG902
BHOH948
BHOH1037

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PIN A 905
ChainResidue
AGLN294
ALYS295
ALEU297
AHOH1066
AHOH1135
AHOH1146

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PIN B 906
ChainResidue
BGLN294
BLYS295
BLEU297
BHOH1216
BHOH1299

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Nucleophile => ECO:0000269|PubMed:16672222
ChainResidueDetails
AASP49
BASP49

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: Proton donor => ECO:0000269|PubMed:16672222
ChainResidueDetails
AASP51
BASP51

site_idSWS_FT_FI3
Number of Residues10
DetailsBINDING: BINDING => ECO:0000269|PubMed:16672222
ChainResidueDetails
AASP49
AASP238
BASP49
BASP51
BSER164
BLYS213
BASP238
AASP51
ASER164
ALYS213

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q9W197
ChainResidueDetails
BGLU96
BSER117
AGLU96
ASER117

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:21183079
ChainResidueDetails
ASER239
BSER239

221051

PDB entries from 2024-06-12

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