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2BI3

Radiation damage of the Schiff base in phosphoserine aminotransferase (structure D)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004648molecular_functionO-phospho-L-serine:2-oxoglutarate aminotransferase activity
A0005737cellular_componentcytoplasm
A0006563biological_processL-serine metabolic process
A0006564biological_processL-serine biosynthetic process
A0008483molecular_functiontransaminase activity
A0030170molecular_functionpyridoxal phosphate binding
B0004648molecular_functionO-phospho-L-serine:2-oxoglutarate aminotransferase activity
B0005737cellular_componentcytoplasm
B0006563biological_processL-serine metabolic process
B0006564biological_processL-serine biosynthetic process
B0008483molecular_functiontransaminase activity
B0030170molecular_functionpyridoxal phosphate binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A1362
ChainResidue
AASP256
AHOH2183
AHOH2187
AHOH2188
BGLU51
BHOH2063

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A1363
ChainResidue
BHOH2084
BHOH2180
AASP344
AHOH2268
BASP66

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CL A1364
ChainResidue
ASER101
ATRP102
AASN151
ATHR152
AILE153
ATYR154
AHOH2091

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A1365
ChainResidue
ATRP102
ATHR152
AARG334
AHOH2153

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B1362
ChainResidue
AHOH2205
AHOH2207
BHOH2110
BHOH2242
BHOH2249
BHOH2252

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B1363
ChainResidue
BASP256
BHOH2215
BHOH2221
BHOH2223

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL B1364
ChainResidue
BSER101
BTRP102
BASN151
BTHR152
BILE153
BHOH2150

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL B1365
ChainResidue
BTRP102
BILE153
BARG334
BHOH2014
BHOH2297

site_idAC9
Number of Residues14
DetailsBINDING SITE FOR RESIDUE PLP A1361
ChainResidue
AGLY75
AALA76
ASER77
ATRP102
ATHR152
AASP172
ASER174
AGLN195
ALYS196
AHOH2277
AHOH2278
AHOH2279
BASN237
BTHR238

site_idBC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE 1PE A1366
ChainResidue
AASP279
ALYS291
AHOH2280
AHOH2283
BGLU269
BILE343
BHOH2238

site_idBC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE PLP B1361
ChainResidue
AASN237
ATHR238
AHOH2174
BGLY75
BALA76
BSER77
BPHE80
BTRP102
BTHR152
BASP172
BSER174
BGLN195
BLYS196
BHOH2319
BHOH2320

site_idBC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PEG A1367
ChainResidue
AGLN159
ALYS291
AARG294
ALEU296
AHOH2284

site_idBC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PEG A1368
ChainResidue
AGLU104
ALYS123

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PEG B1366
ChainResidue
BGLN159
BTYR275
BLYS291
BGLY292
BARG294
BLEU296

Functional Information from PROSITE/UniProt
site_idPS00595
Number of Residues20
DetailsAA_TRANSFER_CLASS_5 Aminotransferases class-V pyridoxal-phosphate attachment site. FGMIyaGAQKnlgps.GvTvV
ChainResidueDetails
APHE187-VAL206

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AARG42
BARG42

site_idSWS_FT_FI2
Number of Residues12
DetailsBINDING:
ChainResidueDetails
BTHR152
BASP172
BGLN195
BASN237
AALA76
ATRP102
ATHR152
AASP172
AGLN195
AASN237
BALA76
BTRP102

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: N6-(pyridoxal phosphate)lysine
ChainResidueDetails
ALYS196
BLYS196

220472

PDB entries from 2024-05-29

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