Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1X09

Crystal structure of the D26A mutant UPPs in complex with magnesium and isopentenyl pyrophosphate

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0008360biological_processregulation of cell shape
A0008834molecular_functiondi-trans,poly-cis-undecaprenyl-diphosphate synthase activity
A0009252biological_processpeptidoglycan biosynthetic process
A0016094biological_processpolyprenol biosynthetic process
A0016740molecular_functiontransferase activity
A0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
A0036094molecular_functionsmall molecule binding
A0042803molecular_functionprotein homodimerization activity
A0043164biological_processGram-negative-bacterium-type cell wall biogenesis
A0045547molecular_functiondehydrodolichyl diphosphate synthase activity
A0046872molecular_functionmetal ion binding
A0051301biological_processcell division
A0071555biological_processcell wall organization
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 900
ChainResidue
AIPE902
AHOH903
AHOH904
AHOH905
AHOH906

site_idAC2
Number of Residues12
DetailsBINDING SITE FOR RESIDUE IPE A 901
ChainResidue
AARG30
AARG39
AHIS43
AHOH519
AHOH663
AHOH664
AHOH903
AHOH904
AALA26
AGLY27
AASN28
AGLY29

site_idAC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE IPE A 902
ChainResidue
AMET25
ATYR68
AALA69
APHE70
AASN74
AARG77
AARG194
AARG200
ASER202
AHOH550
AHOH776
AMG900
AHOH903
AHOH904
AHOH906

Functional Information from PROSITE/UniProt
site_idPS01066
Number of Residues18
DetailsUPP_SYNTHASE Undecaprenyl pyrophosphate synthase family signature. DLVIRTGGehRiSnFLLW
ChainResidueDetails
AASP190-TRP207

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE:
ChainResidueDetails
AALA26

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Proton acceptor => ECO:0000250
ChainResidueDetails
AASN74

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING:
ChainResidueDetails
AALA26
AHIS199
AGLU213
AARG200

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000305|PubMed:15044730
ChainResidueDetails
ATRP31
ATRP75

site_idSWS_FT_FI5
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15044730
ChainResidueDetails
AHIS43
AARG77
AARG194
AARG39

site_idSWS_FT_FI6
Number of Residues1
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
ASER71

site_idSWS_FT_FI7
Number of Residues1
DetailsSITE: Required for continued chain elongation
ChainResidueDetails
AALA69

site_idSWS_FT_FI8
Number of Residues1
DetailsSITE: Important for determining product length
ChainResidueDetails
ALEU137

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon