1W6U
Structure of human DECR ternary complex
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005634 | cellular_component | nucleus |
A | 0005654 | cellular_component | nucleoplasm |
A | 0005739 | cellular_component | mitochondrion |
A | 0005759 | cellular_component | mitochondrial matrix |
A | 0005829 | cellular_component | cytosol |
A | 0006631 | biological_process | fatty acid metabolic process |
A | 0006635 | biological_process | fatty acid beta-oxidation |
A | 0008670 | molecular_function | 2,4-dienoyl-CoA reductase (NADPH) activity |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0042802 | molecular_function | identical protein binding |
A | 0070402 | molecular_function | NADPH binding |
A | 0120162 | biological_process | positive regulation of cold-induced thermogenesis |
A | 1902494 | cellular_component | catalytic complex |
B | 0005634 | cellular_component | nucleus |
B | 0005654 | cellular_component | nucleoplasm |
B | 0005739 | cellular_component | mitochondrion |
B | 0005759 | cellular_component | mitochondrial matrix |
B | 0005829 | cellular_component | cytosol |
B | 0006631 | biological_process | fatty acid metabolic process |
B | 0006635 | biological_process | fatty acid beta-oxidation |
B | 0008670 | molecular_function | 2,4-dienoyl-CoA reductase (NADPH) activity |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0042802 | molecular_function | identical protein binding |
B | 0070402 | molecular_function | NADPH binding |
B | 0120162 | biological_process | positive regulation of cold-induced thermogenesis |
B | 1902494 | cellular_component | catalytic complex |
C | 0005634 | cellular_component | nucleus |
C | 0005654 | cellular_component | nucleoplasm |
C | 0005739 | cellular_component | mitochondrion |
C | 0005759 | cellular_component | mitochondrial matrix |
C | 0005829 | cellular_component | cytosol |
C | 0006631 | biological_process | fatty acid metabolic process |
C | 0006635 | biological_process | fatty acid beta-oxidation |
C | 0008670 | molecular_function | 2,4-dienoyl-CoA reductase (NADPH) activity |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0042802 | molecular_function | identical protein binding |
C | 0070402 | molecular_function | NADPH binding |
C | 0120162 | biological_process | positive regulation of cold-induced thermogenesis |
C | 1902494 | cellular_component | catalytic complex |
D | 0005634 | cellular_component | nucleus |
D | 0005654 | cellular_component | nucleoplasm |
D | 0005739 | cellular_component | mitochondrion |
D | 0005759 | cellular_component | mitochondrial matrix |
D | 0005829 | cellular_component | cytosol |
D | 0006631 | biological_process | fatty acid metabolic process |
D | 0006635 | biological_process | fatty acid beta-oxidation |
D | 0008670 | molecular_function | 2,4-dienoyl-CoA reductase (NADPH) activity |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0042802 | molecular_function | identical protein binding |
D | 0070402 | molecular_function | NADPH binding |
D | 0120162 | biological_process | positive regulation of cold-induced thermogenesis |
D | 1902494 | cellular_component | catalytic complex |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE HXC A1330 |
Chain | Residue |
A | ARG119 |
A | TYR199 |
A | SER210 |
A | NAP1329 |
A | HOH2075 |
A | HOH2132 |
A | HOH2134 |
A | HOH2137 |
D | GLU326 |
A | ALA146 |
A | GLY147 |
A | ASN148 |
A | PHE149 |
A | SER157 |
A | ASN159 |
A | THR163 |
A | THR197 |
site_id | AC2 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE HXC B1331 |
Chain | Residue |
B | ARG91 |
B | ARG119 |
B | GLY147 |
B | ASN148 |
B | PHE149 |
B | SER157 |
B | ASN159 |
B | ALA160 |
B | TYR199 |
B | NAP1330 |
B | HOH2069 |
B | HOH2147 |
B | HOH2148 |
C | GLU326 |
C | HOH2126 |
site_id | AC3 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE HXC C1330 |
Chain | Residue |
B | GLU310 |
B | GLU326 |
C | ALA146 |
C | GLY147 |
C | ASN148 |
C | PHE149 |
C | SER157 |
C | ASN159 |
C | THR163 |
C | THR197 |
C | TYR199 |
C | NAP1329 |
C | HOH2047 |
C | HOH2079 |
C | HOH2128 |
C | HOH2130 |
C | HOH2131 |
site_id | AC4 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE HXC D1329 |
Chain | Residue |
A | GLU326 |
D | ARG91 |
D | ALA146 |
D | GLY147 |
D | ASN148 |
D | PHE149 |
D | SER157 |
D | ASN159 |
D | THR163 |
D | ILE164 |
D | LYS214 |
D | NAP1328 |
D | HOH2161 |
D | HOH2162 |
site_id | AC5 |
Number of Residues | 25 |
Details | BINDING SITE FOR RESIDUE NAP A1329 |
Chain | Residue |
A | GLY66 |
A | THR69 |
A | GLY70 |
A | LEU71 |
A | SER90 |
A | ARG91 |
A | LYS92 |
A | CYS116 |
A | ASP117 |
A | VAL118 |
A | ASN144 |
A | ALA145 |
A | ALA146 |
A | ILE195 |
A | THR196 |
A | LYS214 |
A | PRO240 |
A | GLY241 |
A | PRO242 |
A | ILE243 |
A | HXC1330 |
A | HOH2129 |
A | HOH2130 |
A | HOH2131 |
A | HOH2132 |
site_id | AC6 |
Number of Residues | 26 |
Details | BINDING SITE FOR RESIDUE NAP B1330 |
Chain | Residue |
B | ASN144 |
B | ALA145 |
B | ALA146 |
B | ILE167 |
B | ILE195 |
B | THR196 |
B | LYS214 |
B | PRO240 |
B | GLY241 |
B | PRO242 |
B | ILE243 |
B | HXC1331 |
B | HOH2060 |
B | HOH2144 |
B | HOH2146 |
B | GLY66 |
B | THR69 |
B | GLY70 |
B | LEU71 |
B | SER90 |
B | ARG91 |
B | LYS92 |
B | CYS116 |
B | ASP117 |
B | VAL118 |
B | ARG119 |
site_id | AC7 |
Number of Residues | 27 |
Details | BINDING SITE FOR RESIDUE NAP C1329 |
Chain | Residue |
C | GLY66 |
C | THR69 |
C | GLY70 |
C | LEU71 |
C | SER90 |
C | ARG91 |
C | LYS92 |
C | CYS116 |
C | ASP117 |
C | VAL118 |
C | ASN144 |
C | ALA145 |
C | ALA146 |
C | ILE195 |
C | THR196 |
C | LYS214 |
C | PRO240 |
C | GLY241 |
C | PRO242 |
C | ILE243 |
C | THR245 |
C | HXC1330 |
C | HOH2009 |
C | HOH2010 |
C | HOH2127 |
C | HOH2128 |
C | HOH2129 |
site_id | AC8 |
Number of Residues | 26 |
Details | BINDING SITE FOR RESIDUE NAP D1328 |
Chain | Residue |
D | GLY66 |
D | THR69 |
D | GLY70 |
D | LEU71 |
D | SER90 |
D | ARG91 |
D | LYS92 |
D | CYS116 |
D | ASP117 |
D | VAL118 |
D | ASN144 |
D | ALA145 |
D | ALA146 |
D | ILE195 |
D | THR196 |
D | LYS214 |
D | PRO240 |
D | GLY241 |
D | PRO242 |
D | ILE243 |
D | HXC1329 |
D | HOH2033 |
D | HOH2156 |
D | HOH2157 |
D | HOH2158 |
D | HOH2159 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: Proton acceptor => ECO:0000255 |
Chain | Residue | Details |
A | TYR199 | |
B | TYR199 | |
C | TYR199 | |
D | TYR199 |
site_id | SWS_FT_FI2 |
Number of Residues | 28 |
Details | BINDING: BINDING => ECO:0000269|PubMed:15531764 |
Chain | Residue | Details |
A | GLY66 | |
B | ARG119 | |
B | PHE149 | |
B | SER157 | |
B | LYS214 | |
B | PRO240 | |
C | GLY66 | |
C | ASP117 | |
C | ARG119 | |
C | PHE149 | |
C | SER157 | |
A | ASP117 | |
C | LYS214 | |
C | PRO240 | |
D | GLY66 | |
D | ASP117 | |
D | ARG119 | |
D | PHE149 | |
D | SER157 | |
D | LYS214 | |
D | PRO240 | |
A | ARG119 | |
A | PHE149 | |
A | SER157 | |
A | LYS214 | |
A | PRO240 | |
B | GLY66 | |
B | ASP117 |
site_id | SWS_FT_FI3 |
Number of Residues | 8 |
Details | BINDING: BINDING => ECO:0000250 |
Chain | Residue | Details |
A | ARG91 | |
A | ARG251 | |
B | ARG91 | |
B | ARG251 | |
C | ARG91 | |
C | ARG251 | |
D | ARG91 | |
D | ARG251 |
site_id | SWS_FT_FI4 |
Number of Residues | 24 |
Details | MOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:Q9CQ62 |
Chain | Residue | Details |
A | LYS42 | |
B | LYS244 | |
B | LYS260 | |
B | LYS319 | |
C | LYS42 | |
C | LYS49 | |
C | LYS97 | |
C | LYS244 | |
C | LYS260 | |
C | LYS319 | |
D | LYS42 | |
A | LYS49 | |
D | LYS49 | |
D | LYS97 | |
D | LYS244 | |
D | LYS260 | |
D | LYS319 | |
A | LYS97 | |
A | LYS244 | |
A | LYS260 | |
A | LYS319 | |
B | LYS42 | |
B | LYS49 | |
B | LYS97 |
site_id | SWS_FT_FI5 |
Number of Residues | 4 |
Details | MOD_RES: Phosphothreonine => ECO:0007744|PubMed:24275569 |
Chain | Residue | Details |
A | THR69 | |
B | THR69 | |
C | THR69 | |
D | THR69 |
site_id | SWS_FT_FI6 |
Number of Residues | 4 |
Details | MOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:Q9CQ62 |
Chain | Residue | Details |
A | LYS73 | |
B | LYS73 | |
C | LYS73 | |
D | LYS73 |
site_id | SWS_FT_FI7 |
Number of Residues | 4 |
Details | MOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861 |
Chain | Residue | Details |
A | LYS230 | |
B | LYS230 | |
C | LYS230 | |
D | LYS230 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1qsg |
Chain | Residue | Details |
A | VAL207 | |
A | LYS214 |
site_id | CSA2 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1qsg |
Chain | Residue | Details |
B | VAL207 | |
B | LYS214 |
site_id | CSA3 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1qsg |
Chain | Residue | Details |
C | VAL207 | |
C | LYS214 |
site_id | CSA4 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1qsg |
Chain | Residue | Details |
D | VAL207 | |
D | LYS214 |
site_id | CSA5 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1qsg |
Chain | Residue | Details |
A | LYS214 | |
A | SER210 |
site_id | CSA6 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1qsg |
Chain | Residue | Details |
B | LYS214 | |
B | SER210 |
site_id | CSA7 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1qsg |
Chain | Residue | Details |
C | LYS214 | |
C | SER210 |
site_id | CSA8 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1qsg |
Chain | Residue | Details |
D | LYS214 | |
D | SER210 |