Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1U8B

Crystal structure of the methylated N-ADA/DNA complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003700molecular_functionDNA-binding transcription factor activity
A0006281biological_processDNA repair
A0006355biological_processregulation of DNA-templated transcription
A0008168molecular_functionmethyltransferase activity
A0008270molecular_functionzinc ion binding
A0043565molecular_functionsequence-specific DNA binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 150
ChainResidue
ASMC38
ACYS42
ACYS69
ACYS72

Functional Information from PROSITE/UniProt
site_idPS00041
Number of Residues43
DetailsHTH_ARAC_FAMILY_1 Bacterial regulatory proteins, araC family signature. KIthACrlLeqetpvt..LeALADQvAMspfh.LhrlFKAttGmTP
ChainResidueDetails
ALYS86-PRO128

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues19
DetailsDNA_BIND: H-T-H motif => ECO:0000255|PROSITE-ProRule:PRU00593
ChainResidueDetails
ALEU102-LYS121

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Nucleophile; methyl group acceptor from methylphosphotriester => ECO:0000255|PROSITE-ProRule:PRU10017, ECO:0000269|PubMed:16452614
ChainResidueDetails
ASMC38

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:16209950
ChainResidueDetails
ATHR34
AARG43
AARG45
AARG67

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING:
ChainResidueDetails
ASMC38
ACYS42
ACYS69
ACYS72

site_idSWS_FT_FI5
Number of Residues1
DetailsSITE: Cleavage
ChainResidueDetails
APRO128

Catalytic Information from CSA
site_idMCSA1
Number of Residues4
DetailsM-CSA 295
ChainResidueDetails
ASMC38activator, attractive charge-charge interaction, metal ligand, nucleophile
ACYS42metal ligand
ACYS69metal ligand
ACYS72metal ligand

site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1adn
ChainResidueDetails
ACYS69

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon