1Q0K
Crystal structure of Ni-containing superoxide dismutase with Ni-ligation corresponding to the thiosulfate-reduced state
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004784 | molecular_function | superoxide dismutase activity |
A | 0016151 | molecular_function | nickel cation binding |
A | 0016209 | molecular_function | antioxidant activity |
B | 0004784 | molecular_function | superoxide dismutase activity |
B | 0016151 | molecular_function | nickel cation binding |
B | 0016209 | molecular_function | antioxidant activity |
C | 0004784 | molecular_function | superoxide dismutase activity |
C | 0016151 | molecular_function | nickel cation binding |
C | 0016209 | molecular_function | antioxidant activity |
D | 0004784 | molecular_function | superoxide dismutase activity |
D | 0016151 | molecular_function | nickel cation binding |
D | 0016209 | molecular_function | antioxidant activity |
E | 0004784 | molecular_function | superoxide dismutase activity |
E | 0016151 | molecular_function | nickel cation binding |
E | 0016209 | molecular_function | antioxidant activity |
F | 0004784 | molecular_function | superoxide dismutase activity |
F | 0016151 | molecular_function | nickel cation binding |
F | 0016209 | molecular_function | antioxidant activity |
G | 0004784 | molecular_function | superoxide dismutase activity |
G | 0016151 | molecular_function | nickel cation binding |
G | 0016209 | molecular_function | antioxidant activity |
H | 0004784 | molecular_function | superoxide dismutase activity |
H | 0016151 | molecular_function | nickel cation binding |
H | 0016209 | molecular_function | antioxidant activity |
I | 0004784 | molecular_function | superoxide dismutase activity |
I | 0016151 | molecular_function | nickel cation binding |
I | 0016209 | molecular_function | antioxidant activity |
J | 0004784 | molecular_function | superoxide dismutase activity |
J | 0016151 | molecular_function | nickel cation binding |
J | 0016209 | molecular_function | antioxidant activity |
K | 0004784 | molecular_function | superoxide dismutase activity |
K | 0016151 | molecular_function | nickel cation binding |
K | 0016209 | molecular_function | antioxidant activity |
L | 0004784 | molecular_function | superoxide dismutase activity |
L | 0016151 | molecular_function | nickel cation binding |
L | 0016209 | molecular_function | antioxidant activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NI A 118 |
Chain | Residue |
A | HIS1 |
A | CYS2 |
A | ASP3 |
A | CYS6 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NI B 118 |
Chain | Residue |
B | HIS1 |
B | CYS2 |
B | ASP3 |
B | CYS6 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NI C 118 |
Chain | Residue |
C | CYS2 |
C | ASP3 |
C | CYS6 |
C | HIS1 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NI D 118 |
Chain | Residue |
D | HIS1 |
D | CYS2 |
D | ASP3 |
D | CYS6 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NI E 118 |
Chain | Residue |
E | HIS1 |
E | CYS2 |
E | ASP3 |
E | CYS6 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NI F 118 |
Chain | Residue |
F | HIS1 |
F | CYS2 |
F | ASP3 |
F | CYS6 |
site_id | AC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE NI G 118 |
Chain | Residue |
G | HIS1 |
G | CYS2 |
G | CYS6 |
site_id | AC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NI H 118 |
Chain | Residue |
H | HIS1 |
H | CYS2 |
H | ASP3 |
H | CYS6 |
site_id | AC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NI I 118 |
Chain | Residue |
I | HIS1 |
I | CYS2 |
I | ASP3 |
I | CYS6 |
site_id | BC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NI J 118 |
Chain | Residue |
J | HIS1 |
J | CYS2 |
J | ASP3 |
J | CYS6 |
site_id | BC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NI K 118 |
Chain | Residue |
K | HIS1 |
K | CYS2 |
K | ASP3 |
K | CYS6 |
site_id | BC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NI L 118 |
Chain | Residue |
L | HIS1 |
L | CYS2 |
L | ASP3 |
L | CYS6 |
site_id | BC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 A 9001 |
Chain | Residue |
A | PRO5 |
A | GLY7 |
A | TYR9 |
A | LYS64 |
site_id | BC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 B 9002 |
Chain | Residue |
B | PRO5 |
B | GLY7 |
B | TYR9 |
B | LYS64 |
site_id | BC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 C 9003 |
Chain | Residue |
C | PRO5 |
C | GLY7 |
C | TYR9 |
C | LYS64 |
site_id | BC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 D 9004 |
Chain | Residue |
D | PRO5 |
D | GLY7 |
D | TYR9 |
D | LYS64 |
site_id | BC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 E 9005 |
Chain | Residue |
E | PRO5 |
E | GLY7 |
E | TYR9 |
E | LYS64 |
site_id | BC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 F 9006 |
Chain | Residue |
F | PRO5 |
F | GLY7 |
F | TYR9 |
F | LYS64 |
F | HOH9053 |
site_id | CC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 G 9007 |
Chain | Residue |
G | PRO5 |
G | GLY7 |
G | TYR9 |
site_id | CC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 H 9008 |
Chain | Residue |
H | PRO5 |
H | GLY7 |
H | TYR9 |
H | ASP61 |
H | LYS64 |
H | HOH9040 |
site_id | CC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 I 9009 |
Chain | Residue |
I | PRO5 |
I | GLY7 |
I | TYR9 |
I | LYS64 |
site_id | CC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 J 9010 |
Chain | Residue |
J | PRO5 |
J | GLY7 |
J | TYR9 |
J | LYS64 |
J | HOH9031 |
site_id | CC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 K 9011 |
Chain | Residue |
K | PRO5 |
K | GLY7 |
K | TYR9 |
K | LYS64 |
site_id | CC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 L 9012 |
Chain | Residue |
L | PRO5 |
L | GLY7 |
L | TYR9 |
L | LYS64 |
site_id | CC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE THJ C 7001 |
Chain | Residue |
A | HIS53 |
A | HOH9035 |
C | ARG47 |
C | LEU50 |
A | HIS1 |
site_id | CC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE THJ B 7002 |
Chain | Residue |
B | HIS53 |
B | HIS54 |
B | HOH9015 |
E | ARG47 |
E | LEU50 |
site_id | CC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE THJ A 7003 |
Chain | Residue |
A | GLU17 |
A | ARG47 |
A | LEU50 |
A | HOH9019 |
C | HIS53 |
site_id | DC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE THJ D 7004 |
Chain | Residue |
D | HIS53 |
D | HOH9019 |
F | ARG47 |
site_id | DC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE THJ B 7005 |
Chain | Residue |
B | GLU17 |
B | ARG47 |
B | LEU50 |
B | HOH9023 |
E | HIS53 |
E | HIS54 |
E | HOH9032 |
site_id | DC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE THJ D 7006 |
Chain | Residue |
D | ARG47 |
D | LEU50 |
F | HIS53 |
F | HOH9014 |
site_id | DC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE THJ G 7007 |
Chain | Residue |
G | HIS53 |
G | HOH9021 |
G | HOH9049 |
I | GLU17 |
I | ARG47 |
I | LEU50 |
site_id | DC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE THJ H 7008 |
Chain | Residue |
H | HIS53 |
H | HOH9018 |
K | ARG47 |
K | LEU50 |
site_id | DC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE THJ I 7009 |
Chain | Residue |
G | ARG47 |
G | LEU50 |
I | HIS53 |
I | HIS54 |
site_id | DC7 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE THJ L 7010 |
Chain | Residue |
J | HIS53 |
J | HIS54 |
J | HOH9052 |
L | ARG47 |
L | LEU50 |
L | HOH9029 |
site_id | DC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE THJ H 7011 |
Chain | Residue |
H | ARG47 |
H | LEU50 |
K | HIS1 |
K | HIS53 |
K | HOH9024 |
site_id | DC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE THJ L 7012 |
Chain | Residue |
J | ARG47 |
J | LEU50 |
L | HIS53 |
L | HIS54 |
L | HOH9037 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 36 |
Details | BINDING: |
Chain | Residue | Details |
A | HIS1 | |
D | HIS1 | |
D | CYS2 | |
D | CYS6 | |
E | HIS1 | |
E | CYS2 | |
E | CYS6 | |
F | HIS1 | |
F | CYS2 | |
F | CYS6 | |
G | HIS1 | |
A | CYS2 | |
G | CYS2 | |
G | CYS6 | |
H | HIS1 | |
H | CYS2 | |
H | CYS6 | |
I | HIS1 | |
I | CYS2 | |
I | CYS6 | |
J | HIS1 | |
J | CYS2 | |
A | CYS6 | |
J | CYS6 | |
K | HIS1 | |
K | CYS2 | |
K | CYS6 | |
L | HIS1 | |
L | CYS2 | |
L | CYS6 | |
B | HIS1 | |
B | CYS2 | |
B | CYS6 | |
C | HIS1 | |
C | CYS2 | |
C | CYS6 |