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1OVD

THE K136E MUTANT OF LACTOCOCCUS LACTIS DIHYDROOROTATE DEHYDROGENASE A IN COMPLEX WITH OROTATE

Functional Information from GO Data
ChainGOidnamespacecontents
A0004152molecular_functiondihydroorotate dehydrogenase activity
A0005737cellular_componentcytoplasm
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0006222biological_processUMP biosynthetic process
A0016491molecular_functionoxidoreductase activity
A0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors
A0044205biological_process'de novo' UMP biosynthetic process
A1990663molecular_functiondihydroorotate dehydrogenase (fumarate) activity
B0004152molecular_functiondihydroorotate dehydrogenase activity
B0005737cellular_componentcytoplasm
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0006221biological_processpyrimidine nucleotide biosynthetic process
B0006222biological_processUMP biosynthetic process
B0016491molecular_functionoxidoreductase activity
B0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors
B0044205biological_process'de novo' UMP biosynthetic process
B1990663molecular_functiondihydroorotate dehydrogenase (fumarate) activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 850
ChainResidue
ALYS33
ASER35
AHOH907
AHOH988
AHOH1074
AHOH1152

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 851
ChainResidue
BHOH1066
BHOH1071
BLYS33
BSER35
BHOH985

site_idAC3
Number of Residues22
DetailsBINDING SITE FOR RESIDUE FMN A 800
ChainResidue
AALA18
ASER19
AGLY20
ALYS43
ASER44
ATYR58
AASN67
AASN127
ALYS164
AVAL192
AASN193
AGLY221
AILE224
ATHR248
AGLY249
AGLY250
AGLY271
ATHR272
AORO900
AHOH912
AHOH993
AHOH995

site_idAC4
Number of Residues22
DetailsBINDING SITE FOR RESIDUE FMN B 801
ChainResidue
BALA18
BSER19
BGLY20
BLYS43
BSER44
BTYR58
BASN67
BASN127
BLYS164
BVAL192
BASN193
BGLY221
BILE224
BTHR248
BGLY249
BGLY250
BGLY271
BTHR272
BORO901
BHOH902
BHOH904
BHOH990

site_idAC5
Number of Residues12
DetailsBINDING SITE FOR RESIDUE ORO A 900
ChainResidue
ALYS43
AASN67
AMET69
AGLY70
ALEU71
AASN127
ACYS130
APRO131
AASN132
AASN193
ASER194
AFMN800

site_idAC6
Number of Residues12
DetailsBINDING SITE FOR RESIDUE ORO B 901
ChainResidue
BLYS43
BASN67
BMET69
BGLY70
BLEU71
BASN127
BCYS130
BPRO131
BASN132
BASN193
BSER194
BFMN801

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B 491
ChainResidue
ALYS213
AASP214
APHE216
BLEU171
BALA234
BARG238
BHOH959

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 492
ChainResidue
AALA9
ALYS10
AGLY94

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 493
ChainResidue
AALA234
AARG238
AHOH1050
BLYS213
BASP214
BPHE216

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 494
ChainResidue
BHOH1114
BALA9
BLYS10
BGLU93
BGLY94

site_idBC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE GOL A 495
ChainResidue
ATYR141
ATYR168
APHE169
AASP170
AHIS173
AHOH901
AHOH902
BTYR141
BTYR168
BPHE169
BHIS173

Functional Information from PROSITE/UniProt
site_idPS00911
Number of Residues20
DetailsDHODEHASE_1 Dihydroorotate dehydrogenase signature 1. GayitKSSTlekReGNplPR
ChainResidueDetails
AGLY38-ARG57

site_idPS00912
Number of Residues21
DetailsDHODEHASE_2 Dihydroorotate dehydrogenase signature 2. IIGtGGIeTgqdAfeHLlCGA
ChainResidueDetails
AILE245-ALA265

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Nucleophile
ChainResidueDetails
ACYS130
BCYS130

site_idSWS_FT_FI2
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:9032071, ECO:0000269|PubMed:9655329
ChainResidueDetails
ASER19
BGLY221
BGLY249
BGLY271
ALYS164
AVAL192
AGLY221
AGLY249
AGLY271
BSER19
BLYS164
BVAL192

site_idSWS_FT_FI3
Number of Residues8
DetailsBINDING:
ChainResidueDetails
ALYS43
AASN67
AASN127
AASN193
BLYS43
BASN67
BASN127
BASN193

Catalytic Information from CSA
site_idMCSA1
Number of Residues2
DetailsM-CSA 892
ChainResidueDetails
ALYS43electrostatic stabiliser
ACYS130proton shuttle (general acid/base)

site_idMCSA2
Number of Residues2
DetailsM-CSA 892
ChainResidueDetails
BLYS43electrostatic stabiliser
BCYS130proton shuttle (general acid/base)

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PDB entries from 2024-04-24

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