1M7H
Crystal Structure of APS kinase from Penicillium Chrysogenum: Structure with APS soaked out of one dimer
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000103 | biological_process | sulfate assimilation |
A | 0004020 | molecular_function | adenylylsulfate kinase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005829 | cellular_component | cytosol |
A | 0009086 | biological_process | methionine biosynthetic process |
A | 0016301 | molecular_function | kinase activity |
A | 0016310 | biological_process | phosphorylation |
A | 0019344 | biological_process | cysteine biosynthetic process |
A | 0070814 | biological_process | hydrogen sulfide biosynthetic process |
B | 0000103 | biological_process | sulfate assimilation |
B | 0004020 | molecular_function | adenylylsulfate kinase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005829 | cellular_component | cytosol |
B | 0009086 | biological_process | methionine biosynthetic process |
B | 0016301 | molecular_function | kinase activity |
B | 0016310 | biological_process | phosphorylation |
B | 0019344 | biological_process | cysteine biosynthetic process |
B | 0070814 | biological_process | hydrogen sulfide biosynthetic process |
C | 0000103 | biological_process | sulfate assimilation |
C | 0004020 | molecular_function | adenylylsulfate kinase activity |
C | 0005524 | molecular_function | ATP binding |
C | 0005829 | cellular_component | cytosol |
C | 0009086 | biological_process | methionine biosynthetic process |
C | 0016301 | molecular_function | kinase activity |
C | 0016310 | biological_process | phosphorylation |
C | 0019344 | biological_process | cysteine biosynthetic process |
C | 0070814 | biological_process | hydrogen sulfide biosynthetic process |
D | 0000103 | biological_process | sulfate assimilation |
D | 0004020 | molecular_function | adenylylsulfate kinase activity |
D | 0005524 | molecular_function | ATP binding |
D | 0005829 | cellular_component | cytosol |
D | 0009086 | biological_process | methionine biosynthetic process |
D | 0016301 | molecular_function | kinase activity |
D | 0016310 | biological_process | phosphorylation |
D | 0019344 | biological_process | cysteine biosynthetic process |
D | 0070814 | biological_process | hydrogen sulfide biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 C 1001 |
Chain | Residue |
C | ARG80 |
C | PHE105 |
C | ILE106 |
C | HOH1328 |
C | HOH1337 |
C | HOH1342 |
site_id | AC2 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 A 1002 |
Chain | Residue |
A | ILE106 |
A | HOH1311 |
A | HOH1312 |
A | HOH1337 |
A | HOH1367 |
A | ARG66 |
A | ARG80 |
A | PHE105 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 B 1003 |
Chain | Residue |
B | THR13 |
B | ARG14 |
B | SER15 |
D | THR13 |
D | ARG14 |
D | SER15 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 C 1004 |
Chain | Residue |
C | HIS8 |
C | ALA9 |
C | SER10 |
C | HOH1379 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 A 1005 |
Chain | Residue |
A | ARG110 |
A | PRO175 |
A | ALA176 |
A | ASN177 |
A | HOH1310 |
A | HOH1376 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 A 1006 |
Chain | Residue |
A | HIS8 |
A | ALA9 |
A | SER10 |
B | HOH1359 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 B 1007 |
Chain | Residue |
B | HIS8 |
B | ALA9 |
B | SER10 |
C | ASP63 |
site_id | AC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 C 1008 |
Chain | Residue |
C | ARG110 |
C | PRO175 |
C | ALA176 |
C | ASN177 |
C | HOH1310 |
C | HOH1363 |
site_id | AC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 A 1009 |
Chain | Residue |
A | TYR172 |
A | GLU173 |
A | ALA174 |
A | HOH1398 |
A | HOH1415 |
D | LYS156 |
site_id | BC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 D 1010 |
Chain | Residue |
A | ASP63 |
D | PHE7 |
D | HIS8 |
D | ALA9 |
D | SER10 |
site_id | BC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 C 1011 |
Chain | Residue |
B | SER76 |
C | SER76 |
C | GLU77 |
C | HOH1349 |
site_id | BC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 A 1012 |
Chain | Residue |
A | GLU77 |
A | HOH1386 |
site_id | BC4 |
Number of Residues | 21 |
Details | BINDING SITE FOR RESIDUE ADP A 1301 |
Chain | Residue |
A | LEU33 |
A | ALA35 |
A | SER36 |
A | GLY37 |
A | LYS38 |
A | SER39 |
A | THR40 |
A | ARG148 |
A | PRO150 |
A | ASN184 |
A | LEU187 |
A | VAL189 |
A | HOH1316 |
A | HOH1332 |
A | HOH1333 |
A | HOH1351 |
A | HOH1369 |
C | ARG148 |
C | ADP1304 |
C | HOH1311 |
C | HOH1364 |
site_id | BC5 |
Number of Residues | 21 |
Details | BINDING SITE FOR RESIDUE ADP B 1302 |
Chain | Residue |
B | HOH1390 |
B | HOH1392 |
B | HOH1395 |
D | GLU186 |
B | LEU33 |
B | ALA35 |
B | SER36 |
B | GLY37 |
B | LYS38 |
B | SER39 |
B | THR40 |
B | ARG148 |
B | PRO150 |
B | LEU187 |
B | HOH1317 |
B | HOH1330 |
B | HOH1341 |
B | HOH1343 |
B | HOH1350 |
B | HOH1352 |
B | HOH1382 |
site_id | BC6 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE ADX B 1303 |
Chain | Residue |
B | SER34 |
B | ARG66 |
B | PHE75 |
B | ARG80 |
B | ASN83 |
B | ILE84 |
B | PHE105 |
B | ILE106 |
B | SER107 |
B | PRO108 |
B | LEU153 |
B | LYS163 |
B | GLU164 |
B | THR166 |
B | HOH1341 |
B | HOH1387 |
B | HOH1434 |
site_id | BC7 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE ADP C 1304 |
Chain | Residue |
A | ARG148 |
A | ADP1301 |
C | LEU33 |
C | ALA35 |
C | SER36 |
C | GLY37 |
C | LYS38 |
C | SER39 |
C | THR40 |
C | ARG148 |
C | ASN184 |
C | LEU187 |
C | HOH1311 |
C | HOH1330 |
C | HOH1338 |
C | HOH1340 |
C | HOH1343 |
C | HOH1350 |
C | HOH1364 |
C | HOH1413 |
site_id | BC8 |
Number of Residues | 21 |
Details | BINDING SITE FOR RESIDUE ADP D 1305 |
Chain | Residue |
B | GLU186 |
D | LEU33 |
D | ALA35 |
D | SER36 |
D | GLY37 |
D | LYS38 |
D | SER39 |
D | THR40 |
D | ARG148 |
D | PRO150 |
D | ASN184 |
D | LEU187 |
D | HOH1327 |
D | HOH1335 |
D | HOH1336 |
D | HOH1337 |
D | HOH1351 |
D | HOH1353 |
D | HOH1359 |
D | HOH1381 |
D | HOH1402 |
site_id | BC9 |
Number of Residues | 19 |
Details | BINDING SITE FOR RESIDUE ADX D 1306 |
Chain | Residue |
D | SER34 |
D | ARG66 |
D | PHE75 |
D | ARG80 |
D | ASN83 |
D | ILE84 |
D | PHE105 |
D | ILE106 |
D | SER107 |
D | PRO108 |
D | LEU153 |
D | ILE162 |
D | LYS163 |
D | GLU164 |
D | PHE165 |
D | THR166 |
D | HOH1337 |
D | HOH1346 |
D | HOH1358 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: Phosphoserine intermediate => ECO:0000250 |
Chain | Residue | Details |
A | SER107 | |
B | SER107 | |
C | SER107 | |
D | SER107 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000255 |
Chain | Residue | Details |
A | GLY32 | |
B | GLY32 | |
C | GLY32 | |
D | GLY32 |