Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1ITK

Crystal structure of catalase-peroxidase from Haloarcula marismortui

Functional Information from GO Data
ChainGOidnamespacecontents
A0004096molecular_functioncatalase activity
A0004601molecular_functionperoxidase activity
A0005829cellular_componentcytosol
A0006979biological_processresponse to oxidative stress
A0016491molecular_functionoxidoreductase activity
A0020037molecular_functionheme binding
A0042744biological_processhydrogen peroxide catabolic process
A0046872molecular_functionmetal ion binding
A0070301biological_processcellular response to hydrogen peroxide
A0098869biological_processcellular oxidant detoxification
B0004096molecular_functioncatalase activity
B0004601molecular_functionperoxidase activity
B0005829cellular_componentcytosol
B0006979biological_processresponse to oxidative stress
B0016491molecular_functionoxidoreductase activity
B0020037molecular_functionheme binding
B0042744biological_processhydrogen peroxide catabolic process
B0046872molecular_functionmetal ion binding
B0070301biological_processcellular response to hydrogen peroxide
B0098869biological_processcellular oxidant detoxification
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 732
ChainResidue
AGLN239
AARG243
AHOH2349

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 733
ChainResidue
APRO282
AILE283
BARG684

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 734
ChainResidue
AARG594
ALYS580
AILE592
ATHR593

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 735
ChainResidue
AARG684
AHOH2724
BPRO282
BILE283
BHOH2473

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 732
ChainResidue
BGLN239
BARG243
BHOH2372

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 733
ChainResidue
BLYS580
BILE592
BTHR593
BARG594
BHOH2192

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 2001
ChainResidue
ASER212
AASN220
APRO224
AASN236

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 2002
ChainResidue
ASER612
BGLY44

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 2003
ChainResidue
AGLY44
BSER612

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 2004
ChainResidue
AVAL581
AASP582
AGLY583
AASN603
AHOH2155

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 2005
ChainResidue
ATRP331
ALYS376
AARG377

site_idBC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CL A 2006
ChainResidue
APRO566
AGLU567
ATHR569
AALA571
APRO572
AHOH2086
AHOH2319

site_idBC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 2007
ChainResidue
ATRP187
BLYS21

site_idBC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 2008
ChainResidue
ALYS710
BGLU47
BGLN145

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 2009
ChainResidue
AGLU47
AGLN145
AHOH2591
BLYS710

site_idBC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 2010
ChainResidue
ALYS21
BTRP187

site_idBC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 2011
ChainResidue
AGLU491
AGLU491
AHOH2129

site_idBC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL A 2012
ChainResidue
AGLY481
AARG487
APHE574
AHOH2057
AHOH2062
AHOH2169

site_idCC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 2013
ChainResidue
AHOH2215

site_idCC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 2014
ChainResidue
AASN220
AHOH2044

site_idCC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 2015
ChainResidue
BGLY108

site_idCC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL B 2016
ChainResidue
BVAL581
BASP582
BGLY583
BASN603
BHOH2256

site_idCC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE UNX A 2017
ChainResidue
ATRP429
AHOH2095
AHOH2632

site_idCC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE UNX B 2018
ChainResidue
BSER212
BASN220
BPRO224
BASN236

site_idCC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE UNX B 2019
ChainResidue
BGLY481
BARG487
BPHE574
BHOH2046
BHOH2160
BHOH2165

site_idCC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE UNX B 2020
ChainResidue
BTRP331
BLYS376
BARG377

site_idCC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE UNX B 2021
ChainResidue
BVAL213
BASN220
BHOH2148
BHOH2301

site_idDC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE UNX B 2022
ChainResidue
BMET427
BTRP429
BHOH2227

site_idDC2
Number of Residues23
DetailsBINDING SITE FOR RESIDUE HEM A 800
ChainResidue
ALEU89
AARG92
ATRP95
APRO221
ALEU254
AILE255
AGLY258
AHIS259
APHE261
AGLY262
ALYS263
AVAL264
AHIS265
ATHR304
ASER305
ATRP311
ATHR371
ATRP403
AHOH2019
AHOH2071
AHOH2102
AHOH2645
APRO88

site_idDC3
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEM B 800
ChainResidue
BPRO88
BTRP95
BPRO221
BLEU254
BILE255
BGLY258
BHIS259
BGLY262
BLYS263
BVAL264
BHIS265
BTHR304
BSER305
BTRP311
BTHR371
BPHE399
BTRP403
BHOH2042
BHOH2117
BHOH2210

Functional Information from PROSITE/UniProt
site_idPS00435
Number of Residues11
DetailsPEROXIDASE_1 Peroxidases proximal heme-ligand signature. TAALIAGGHTF
ChainResidueDetails
ATHR251-PHE261

site_idPS00436
Number of Residues12
DetailsPEROXIDASE_2 Peroxidases active site signature. GPlfIRMaWHSA
ChainResidueDetails
AGLY87-ALA98

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor
ChainResidueDetails
AHIS96
BHIS96

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: axial binding residue
ChainResidueDetails
AHIS259
BHIS259

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Transition state stabilizer
ChainResidueDetails
AARG92
BARG92

site_idSWS_FT_FI4
Number of Residues2
DetailsCROSSLNK: Tryptophyl-tyrosyl-methioninium (Trp-Tyr) (with M-244)
ChainResidueDetails
ATRP95
BTRP95

site_idSWS_FT_FI5
Number of Residues4
DetailsCROSSLNK: Tryptophyl-tyrosyl-methioninium (Tyr-Met) (with W-95)
ChainResidueDetails
ATYR218
AMET244
BTYR218
BMET244

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon