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1GZX

Oxy T State Haemoglobin - Oxygen bound at all four haems

Functional Information from GO Data
ChainGOidnamespacecontents
A0004601molecular_functionperoxidase activity
A0005344molecular_functionoxygen carrier activity
A0005506molecular_functioniron ion binding
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005829cellular_componentcytosol
A0005833cellular_componenthemoglobin complex
A0015670biological_processcarbon dioxide transport
A0015671biological_processoxygen transport
A0016020cellular_componentmembrane
A0019825molecular_functionoxygen binding
A0020037molecular_functionheme binding
A0030185biological_processnitric oxide transport
A0031720molecular_functionhaptoglobin binding
A0031838cellular_componenthaptoglobin-hemoglobin complex
A0042542biological_processresponse to hydrogen peroxide
A0042744biological_processhydrogen peroxide catabolic process
A0043177molecular_functionorganic acid binding
A0046872molecular_functionmetal ion binding
A0070062cellular_componentextracellular exosome
A0071682cellular_componentendocytic vesicle lumen
A0072562cellular_componentblood microparticle
A0098869biological_processcellular oxidant detoxification
B0004601molecular_functionperoxidase activity
B0005344molecular_functionoxygen carrier activity
B0005515molecular_functionprotein binding
B0005576cellular_componentextracellular region
B0005615cellular_componentextracellular space
B0005829cellular_componentcytosol
B0005833cellular_componenthemoglobin complex
B0008217biological_processregulation of blood pressure
B0015670biological_processcarbon dioxide transport
B0015671biological_processoxygen transport
B0019825molecular_functionoxygen binding
B0020037molecular_functionheme binding
B0030185biological_processnitric oxide transport
B0030492molecular_functionhemoglobin binding
B0031720molecular_functionhaptoglobin binding
B0031721molecular_functionhemoglobin alpha binding
B0031838cellular_componenthaptoglobin-hemoglobin complex
B0042542biological_processresponse to hydrogen peroxide
B0042744biological_processhydrogen peroxide catabolic process
B0043177molecular_functionorganic acid binding
B0045429biological_processpositive regulation of nitric oxide biosynthetic process
B0046872molecular_functionmetal ion binding
B0070062cellular_componentextracellular exosome
B0070293biological_processrenal absorption
B0070527biological_processplatelet aggregation
B0071682cellular_componentendocytic vesicle lumen
B0072562cellular_componentblood microparticle
B0097746biological_processblood vessel diameter maintenance
B0098869biological_processcellular oxidant detoxification
B1904724cellular_componenttertiary granule lumen
B1904813cellular_componentficolin-1-rich granule lumen
C0004601molecular_functionperoxidase activity
C0005344molecular_functionoxygen carrier activity
C0005506molecular_functioniron ion binding
C0005515molecular_functionprotein binding
C0005576cellular_componentextracellular region
C0005615cellular_componentextracellular space
C0005829cellular_componentcytosol
C0005833cellular_componenthemoglobin complex
C0015670biological_processcarbon dioxide transport
C0015671biological_processoxygen transport
C0016020cellular_componentmembrane
C0019825molecular_functionoxygen binding
C0020037molecular_functionheme binding
C0030185biological_processnitric oxide transport
C0031720molecular_functionhaptoglobin binding
C0031838cellular_componenthaptoglobin-hemoglobin complex
C0042542biological_processresponse to hydrogen peroxide
C0042744biological_processhydrogen peroxide catabolic process
C0043177molecular_functionorganic acid binding
C0046872molecular_functionmetal ion binding
C0070062cellular_componentextracellular exosome
C0071682cellular_componentendocytic vesicle lumen
C0072562cellular_componentblood microparticle
C0098869biological_processcellular oxidant detoxification
D0004601molecular_functionperoxidase activity
D0005344molecular_functionoxygen carrier activity
D0005515molecular_functionprotein binding
D0005576cellular_componentextracellular region
D0005615cellular_componentextracellular space
D0005829cellular_componentcytosol
D0005833cellular_componenthemoglobin complex
D0008217biological_processregulation of blood pressure
D0015670biological_processcarbon dioxide transport
D0015671biological_processoxygen transport
D0019825molecular_functionoxygen binding
D0020037molecular_functionheme binding
D0030185biological_processnitric oxide transport
D0030492molecular_functionhemoglobin binding
D0031720molecular_functionhaptoglobin binding
D0031721molecular_functionhemoglobin alpha binding
D0031838cellular_componenthaptoglobin-hemoglobin complex
D0042542biological_processresponse to hydrogen peroxide
D0042744biological_processhydrogen peroxide catabolic process
D0043177molecular_functionorganic acid binding
D0045429biological_processpositive regulation of nitric oxide biosynthetic process
D0046872molecular_functionmetal ion binding
D0070062cellular_componentextracellular exosome
D0070293biological_processrenal absorption
D0070527biological_processplatelet aggregation
D0071682cellular_componentendocytic vesicle lumen
D0072562cellular_componentblood microparticle
D0097746biological_processblood vessel diameter maintenance
D0098869biological_processcellular oxidant detoxification
D1904724cellular_componenttertiary granule lumen
D1904813cellular_componentficolin-1-rich granule lumen
Functional Information from PDB Data
site_idAC1
Number of Residues17
DetailsBINDING SITE FOR RESIDUE HEM A1142
ChainResidue
ATYR42
AHIS87
ALEU91
AVAL93
AASN97
APHE98
ALEU136
AOXY1143
AHOH2029
APHE43
AHIS45
APHE46
AHIS58
ALYS61
AALA65
ALEU83
ALEU86

site_idAC2
Number of Residues17
DetailsBINDING SITE FOR RESIDUE HEM B1290
ChainResidue
AHIS72
AASP75
AHOH2040
BHIS206
BLYS209
BVAL210
BLEU234
BHIS235
BLEU239
BVAL241
BASN245
BPHE246
BLEU284
BOXY1291
BHOH2053
BHOH2054
BHOH2055

site_idAC3
Number of Residues17
DetailsBINDING SITE FOR RESIDUE HEM C1542
ChainResidue
BLYS160
CTYR442
CPHE443
CHIS445
CHIS458
CLYS461
CALA465
CLEU486
CHIS487
CLEU491
CVAL493
CASN497
CPHE498
CLEU536
COXY1543
CHOH2043
CHOH2045

site_idAC4
Number of Residues12
DetailsBINDING SITE FOR RESIDUE HEM D1690
ChainResidue
CLYS456
DPHE584
DPHE585
DHIS606
DLYS609
DHIS635
DLEU639
DASN645
DPHE646
DLEU649
DLEU684
DOXY1691

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE OXY A1143
ChainResidue
AHIS58
AVAL62
AHEM1142

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE OXY B1291
ChainResidue
BHIS206
BVAL210
BHEM1290

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE OXY C1543
ChainResidue
CHIS458
CVAL462
CHEM1542

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE OXY D1691
ChainResidue
DHIS606
DVAL610
DHEM1690

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING:
ChainResidueDetails
BVAL144
BHIS145
BLYS225
BHIS286
DVAL544
DHIS545
DLYS625
DHIS686

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: distal binding residue
ChainResidueDetails
BHIS206
DHIS606

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: proximal binding residue
ChainResidueDetails
BHIS235
ALEU91
ALEU106
ATHR108
AVAL121
ASER133
CTHR408
CALA413
CTYR424
CLEU429
CHIS445
DHIS635
CASP447
CSER452
CVAL455
CGLY459
CLEU491
CLEU506
CTHR508
CVAL521
CSER533
ATYR24
ALEU29
AHIS45
AASP47
ASER52
AVAL55
AGLY59

site_idSWS_FT_FI4
Number of Residues38
DetailsSITE: (Microbial infection) Cleavage; by N.americanus apr-2 => ECO:0000269|PubMed:12552433
ChainResidueDetails
BGLU150
BGLY217
BTHR227
BHIS235
BARG247
BLEU253
BGLY262
BPHE265
BALA271
BALA283
BLYS287
BGLY168
DGLU550
DGLY568
DGLY572
DTYR578
DTRP580
DPHE588
DASP595
DGLY599
DPHE614
DGLY617
BGLY172
DTHR627
DHIS635
DARG647
DLEU653
DGLY662
DPHE665
DALA671
DALA683
DLYS687
BTYR178
BTRP180
BPHE188
BASP195
BGLY199
BPHE214

site_idSWS_FT_FI5
Number of Residues6
DetailsSITE: Not glycated => ECO:0000269|PubMed:7358733
ChainResidueDetails
BLYS202
BLYS225
BLYS238
DLYS602
DLYS625
DLYS638

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: N-pyruvate 2-iminyl-valine; in Hb A1b
ChainResidueDetails
BVAL144
DVAL544
ALYS40
CLYS407
CLYS416
CLYS440

site_idSWS_FT_FI7
Number of Residues4
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:24275569
ChainResidueDetails
BSER152
BSER187
DSER552
DSER587

site_idSWS_FT_FI8
Number of Residues6
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:24275569
ChainResidueDetails
BTHR155
BTHR193
BTHR230
DTHR555
DTHR593
DTHR630

site_idSWS_FT_FI9
Number of Residues4
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:4531009
ChainResidueDetails
BLYS202
BLYS225
DLYS602
DLYS625

site_idSWS_FT_FI10
Number of Residues2
DetailsMOD_RES: S-nitrosocysteine => ECO:0000269|PubMed:8637569, ECO:0000269|PubMed:9843411
ChainResidueDetails
BCYS236
DCYS636
ASER131
ASER138
CSER502
CSER524
CSER531
CSER538

site_idSWS_FT_FI11
Number of Residues2
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0000269|PubMed:4531009
ChainResidueDetails
BLYS287
DLYS687
ATHR137
CTHR508
CTHR534
CTHR537

site_idSWS_FT_FI12
Number of Residues2
DetailsCARBOHYD: N-linked (Glc) (glycation) valine; in Hb A1c => ECO:0000269|PubMed:635569
ChainResidueDetails
BVAL144
DVAL544
ALYS40
CLYS407
CLYS416
CLYS440

site_idSWS_FT_FI13
Number of Residues8
DetailsCARBOHYD: N-linked (Glc) (glycation) lysine => ECO:0000269|PubMed:7358733
ChainResidueDetails
BLYS151
BLYS160
BLYS209
BLYS263
DLYS551
DLYS560
DLYS609
DLYS663

site_idSWS_FT_FI14
Number of Residues2
DetailsCARBOHYD: N-linked (Glc) (glycation) lysine; alternate => ECO:0000269|PubMed:7358733
ChainResidueDetails
BLYS287
DLYS687

218853

PDB entries from 2024-04-24

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