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8QDH

Engineered LmrR carrying a cyclic boronate ester formed between Tris and p-boronophenylalanine at position 89

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-1
Synchrotron siteESRF
BeamlineMASSIF-1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-04-23
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.96546
Spacegroup nameP 21 21 21
Unit cell lengths44.714, 53.691, 98.981
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.190 - 1.720
R-factor0.2083
Rwork0.205
R-free0.26000
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.015
RMSD bond angle1.475
Data reduction softwareXDS (20220110)
Data scaling softwareAimless (0.7.9)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX ((1.20rc1_4395: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.4901.750
High resolution limit [Å]1.7201.720
Rmerge0.0822.034
Rmeas0.0862.116
Rpim0.0240.576
Total number of observations32957517356
Number of reflections255381311
<I/σ(I)>14.81.1
Completeness [%]98.2
Redundancy12.913.2
CC(1/2)0.9990.628
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6293Protein was concentrated to 6.5 mg/ml in 20 mM Tris-HCl, pH 8.0, 280 mM NaCl and 1 mM EDTA. Reservoir solution contained 0.2 M NaCl, 20% PEG 6000 in 0.1 M MES, pH 6.0. Crystal was cryo-protected by addition of 25% glycerol.

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