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8EGL

Crystal Structure of Guanylate kinase from Pseudomonas aeruginosa PAO1 in complex with GMP and ADP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E+ SUPERBRIGHT
Temperature [K]100
Detector technologyCCD
Collection date2022-01-18
DetectorRIGAKU SATURN 944+
Wavelength(s)1.5418
Spacegroup nameP 1
Unit cell lengths72.280, 72.370, 144.730
Unit cell angles81.60, 88.00, 60.00
Refinement procedure
Resolution48.150 - 2.350
R-factor0.1968
Rwork0.196
R-free0.22870
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7u5f GMP-bound structure
RMSD bond length0.005
RMSD bond angle0.725
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1 4674)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.410
High resolution limit [Å]2.35010.5102.350
Rmerge0.0580.0160.607
Rmeas0.0630.0170.663
Number of reflections10311811387434
<I/σ(I)>26.37102.643.29
Completeness [%]98.698.494.9
Redundancy7.4597.386.278
CC(1/2)1.0001.0000.824
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5287RigakuReagents. JCSG+ screen, condition G7: 100mM succinic acid pH 7.0, 15% PEG 3350; PsaeA.01463.a.AE1.PW38943 at 20mg/ml + 5mM ATP + 5mM GMP + 5mM MgCl2; tray 320335g7; cryo: 20%EG; puck xhd7-11

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