8DKA
Abp2D receptor binding domain R86E
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2021-11-06 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.072 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.438, 51.847, 81.828 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.796 - 1.900 |
R-factor | 0.213 |
Rwork | 0.212 |
R-free | 0.24030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8dez |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.800 | 1.968 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.115 | 0.887 |
Rmeas | 0.124 | 0.957 |
Rpim | 0.047 | 0.357 |
Number of reflections | 12772 | 1230 |
<I/σ(I)> | 15.46 | 3.17 |
Completeness [%] | 100.0 | 99.92 |
Redundancy | 7 | 7.2 |
CC(1/2) | 0.998 | 0.804 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 292.15 | 0.2 M (NH4)2SO4, 20% Isopropanol, 16% PEG 4000, and 0.1 M HEPES pH 7.5 |