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8DHE

Tannerella forsythia beta-glucuronidase (mL1)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2020-02-15
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.03318
Spacegroup nameP 1 21 1
Unit cell lengths100.442, 139.647, 109.821
Unit cell angles90.00, 94.50, 90.00
Refinement procedure
Resolution51.710 - 2.200
R-factor0.2055
Rwork0.205
R-free0.24450
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3cmg
Data reduction softwareXDS (20200131)
Data scaling softwareAimless (0.7.7)
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]109.480109.4802.240
High resolution limit [Å]2.20012.0502.200
Rmerge0.0960.0160.662
Rmeas0.1290.0220.900
Rpim0.0870.0150.606
Total number of observations288354178613608
Number of reflections1478119487206
<I/σ(I)>4.618.10.8
Completeness [%]96.996.895.8
Redundancy21.91.9
CC(1/2)0.9930.9990.591
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5293.156% (w/v) PEG8000, 12% (v/v) ethylene glycol, 5% (v/v) glycerol, 0.1 M Tris-HCl

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PDB entries from 2024-05-15

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