8CTY
12-mer DNA structure of ExBIM bound to RNase-H
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2018-04-10 |
Detector | MAR scanner 300 mm plate |
Wavelength(s) | 0.97856 |
Spacegroup name | P 1 |
Unit cell lengths | 64.976, 65.834, 95.723 |
Unit cell angles | 84.54, 88.20, 62.49 |
Refinement procedure
Resolution | 32.730 - 2.300 |
R-factor | 0.1989 |
Rwork | 0.196 |
R-free | 0.26060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ey1 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.002 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 32.730 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.133 | 1.043 |
Rpim | 0.053 | 0.683 |
Number of reflections | 61160 | 5899 |
<I/σ(I)> | 3.8 | 0.8 |
Completeness [%] | 98.1 | 94.4 |
Redundancy | 3.8 | 3.1 |
CC(1/2) | 0.386 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M HEPES sodium pH = 7.5, 10% v/v 2-propanol and 20% w/v PEG 4000 |