Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8CTY

12-mer DNA structure of ExBIM bound to RNase-H

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2018-04-10
DetectorMAR scanner 300 mm plate
Wavelength(s)0.97856
Spacegroup nameP 1
Unit cell lengths64.976, 65.834, 95.723
Unit cell angles84.54, 88.20, 62.49
Refinement procedure
Resolution32.730 - 2.300
R-factor0.1989
Rwork0.196
R-free0.26060
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ey1
RMSD bond length0.009
RMSD bond angle1.002
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]32.7302.380
High resolution limit [Å]2.3002.300
Rmerge0.1331.043
Rpim0.0530.683
Number of reflections611605899
<I/σ(I)>3.80.8
Completeness [%]98.194.4
Redundancy3.83.1
CC(1/2)0.386
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2910.1 M HEPES sodium pH = 7.5, 10% v/v 2-propanol and 20% w/v PEG 4000

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon