8BQ1
Herpes simplex virus type 1 protease
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-11-01 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 1.03323 |
Spacegroup name | P 62 |
Unit cell lengths | 70.080, 70.080, 77.330 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.740 - 2.320 |
R-factor | 0.1973 |
Rwork | 0.195 |
R-free | 0.24400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1at3 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.559 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.740 | 47.740 | 2.460 |
High resolution limit [Å] | 2.320 | 6.890 | 2.320 |
Rmerge | 0.130 | 0.067 | 2.918 |
Rmeas | 0.133 | 0.069 | 2.999 |
Number of reflections | 9338 | 363 | 1459 |
<I/σ(I)> | 15.93 | 1.27 | |
Completeness [%] | 99.4 | 97.6 | |
Redundancy | 20.47 | 18.92 | |
CC(1/2) | 0.999 | 0.998 | 0.559 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 5% PEG400, 1.9M ammonium sulfate, 0.2M sodium nitrate |