8B8Y
Crystal structure of PPARG and NCOR2 with an inverse agonist (compound 7e)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-01 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.9686 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.558, 86.759, 120.475 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 60.310 - 2.000 |
R-factor | 0.1958 |
Rwork | 0.193 |
R-free | 0.24190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | internal |
RMSD bond length | 0.008 |
RMSD bond angle | 1.510 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 120.470 | 2.120 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmeas | 0.112 | 2.174 |
Number of reflections | 43770 | 6973 |
<I/σ(I)> | 15.89 | 1.23 |
Completeness [%] | 99.9 | 99.8 |
Redundancy | 13.5 | 13.8 |
CC(1/2) | 0.999 | 0.491 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | PEG 3350 20%, HCOOMg 0.2 M |