7Z5P
Bilirubin oxidase from Bacillus pumilus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-15 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97625 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 198.960, 63.510, 115.960 |
Unit cell angles | 90.00, 124.57, 90.00 |
Refinement procedure
Resolution | 59.220 - 2.991 |
Rwork | 0.254 |
R-free | 0.26700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4q8b |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2-3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.220 | 3.098 |
High resolution limit [Å] | 2.991 | 2.991 |
Rmerge | 0.188 | |
Rmeas | 0.204 | |
Number of reflections | 24048 | 2229 |
<I/σ(I)> | 7.4 | 1.5 |
Completeness [%] | 98.1 | |
Redundancy | 5 | |
CC(1/2) | 0.995 | 0.719 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 0.1 M sodium citrate pH 5.5 and 20 % PEG 3000 |