7YJW
Structure of Leptospira santarosai serovar shermani LRR protein LSS01692
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL15A1 |
Synchrotron site | NSRRC |
Beamline | BL15A1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-06-27 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 65.713, 78.862, 66.578 |
Unit cell angles | 90.00, 106.03, 90.00 |
Refinement procedure
Resolution | 29.650 - 3.200 |
R-factor | 0.2578 |
Rwork | 0.253 |
R-free | 0.30390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4u06 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 3.260 |
High resolution limit [Å] | 3.200 | 8.620 | 3.200 |
Rmerge | 0.080 | 0.014 | 0.619 |
Rmeas | 0.094 | 0.016 | 0.738 |
Rpim | 0.049 | 0.009 | 0.398 |
Total number of observations | 39710 | ||
Number of reflections | 10860 | 539 | 502 |
<I/σ(I)> | 10.5 | ||
Completeness [%] | 99.0 | 94.7 | 98.2 |
Redundancy | 3.7 | 3.4 | 3.2 |
CC(1/2) | 1.000 | 0.863 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 289 | 0.1 M Tris-HCl (pH=8.5), 2% Tasimate pH, and 16% PEG3350 |