7Y1U
Crystal structure of isocitrate dehydrogenase from Campylobacter corcagiensis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08B1-1 |
Synchrotron site | CLSI |
Beamline | 08B1-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-11 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.18067 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.501, 92.694, 147.321 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.930 - 2.500 |
R-factor | 0.1919 |
Rwork | 0.188 |
R-free | 0.25890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1itw |
RMSD bond length | 0.009 |
RMSD bond angle | 1.724 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.110 | 2.600 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.125 | 0.978 |
Rpim | 0.036 | 0.272 |
Number of reflections | 30370 | 3368 |
<I/σ(I)> | 18.3 | 3.1 |
Completeness [%] | 99.9 | |
Redundancy | 13.1 | |
CC(1/2) | 0.999 | 0.856 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.2 M Li2SO4, 0.1 M Tris pH8.5, 40% PEG400 |