7XL0
Crystal structure of Vobarilizumab at 1.70 Angstrom
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-16 |
Detector | DECTRIS EIGER R 4M |
Wavelength(s) | 1.000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 124.591, 56.420, 42.240 |
Unit cell angles | 90.00, 101.92, 90.00 |
Refinement procedure
Resolution | 51.250 - 1.700 |
R-factor | 0.1539 |
Rwork | 0.152 |
R-free | 0.19630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5hvg |
RMSD bond length | 0.006 |
RMSD bond angle | 1.353 |
Data reduction software | MOSFLM (7.2.2) |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.8.2) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.000 | 1.790 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.092 | 0.336 |
Rpim | 0.040 | 0.160 |
Number of reflections | 31315 | 4232 |
<I/σ(I)> | 11.5 | 4.4 |
Completeness [%] | 98.9 | |
Redundancy | 6 | |
CC(1/2) | 0.995 | 0.890 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M lithium sulfate 20% PEG 3,350 |