7WHC
Crystal structure of SARS-CoV-2 3CLpro catalytic domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-11-30 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.474, 121.086, 62.704 |
Unit cell angles | 90.00, 90.01, 90.00 |
Refinement procedure
Resolution | 31.993 - 2.269 |
R-factor | 0.2016 |
Rwork | 0.197 |
R-free | 0.26410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7k0f |
RMSD bond length | 0.009 |
RMSD bond angle | 1.297 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.310 |
High resolution limit [Å] | 2.269 | 2.270 |
Number of reflections | 32201 | 1203 |
<I/σ(I)> | 17 | |
Completeness [%] | 89.0 | 67 |
Redundancy | 3.4 | |
CC(1/2) | 0.995 | 0.734 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 296 | 10% PEG 20000, 0.1M HEPES pH 7.0, 0.2M Calcium Chloride |