7W4Z
Crystal structure of fragmin domain-1 in complex with actin (AMPPNP-form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AichiSR BEAMLINE BL2S1 |
Synchrotron site | AichiSR |
Beamline | BL2S1 |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2017-06-23 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.12 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 57.090, 91.070, 114.850 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.350 - 1.150 |
R-factor | 0.1436 |
Rwork | 0.143 |
R-free | 0.15750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3j8a |
Data reduction software | XDS (Mar 15,2019) |
Data scaling software | XSCALE (Mar 15,2019) |
Phasing software | MOLREP (11.5.02) |
Refinement software | PHENIX (1.18) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.350 | 29.350 | 1.180 |
High resolution limit [Å] | 1.150 | 5.140 | 1.150 |
Rmerge | 0.068 | 0.046 | 1.017 |
Rmeas | 0.072 | 0.048 | 1.106 |
Total number of observations | 1562876 | ||
Number of reflections | 209417 | 2606 | 14871 |
<I/σ(I)> | 12.64 | 48.7 | 1.82 |
Completeness [%] | 98.7 | 99.7 | 95.5 |
Redundancy | 7.463 | 10.412 | 6.39 |
CC(1/2) | 0.999 | 0.998 | 0.631 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 50 mM Na2HPO4, 19% PEG3350 |