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7U9K

Staphylococcus aureus D-alanine-D-alanine ligase in complex with ATP, D-ala-D-ala, Mg2+ and K+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyPIXEL
Collection date2018-08-14
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9537
Spacegroup nameP 1 21 1
Unit cell lengths52.447, 70.058, 91.598
Unit cell angles90.00, 102.58, 90.00
Refinement procedure
Resolution37.680 - 2.000
R-factor0.2413
Rwork0.239
R-free0.27670
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2i87
Data reduction softwareXDS
Data scaling softwareAimless (0.7.7)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.18.2-3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]38.02038.0202.050
High resolution limit [Å]2.0008.9402.000
Rmerge0.2160.0720.693
Rmeas0.2360.0780.748
Rpim0.0930.0300.280
Total number of observations289114325923085
Number of reflections438625183217
<I/σ(I)>9.322.62.9
Completeness [%]99.898.6100
Redundancy6.66.37.2
CC(1/2)0.9890.9940.767
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP289.1520 - 30% PEG 3350, 0.5 M KCl

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PDB entries from 2024-05-15

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