Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7QOA

Structure of CodB, a cytosine transporter in an outward-facing conformation

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2019-10-11
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9686
Spacegroup nameC 2 2 21
Unit cell lengths108.246, 209.027, 102.452
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution73.160 - 2.400
R-factor0.2201
Rwork0.218
R-free0.26520
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2jln
RMSD bond length0.007
RMSD bond angle0.904
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwareMR-Rosetta
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]73.1602.490
High resolution limit [Å]2.4002.400
Rmerge0.374
Number of reflections457544436
<I/σ(I)>11.57
Completeness [%]99.4
Redundancy12.7
CC(1/2)0.9980.466
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE6.52930.1 M Sodium Cacodylate pH 6.5, 0.45 M NaCl, 39% PEG400

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon