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7PJA

Crystal structure of YTHDC1 with compound PSI_DC1_002

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2018-10-18
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1
Spacegroup nameP 1 21 1
Unit cell lengths39.010, 102.090, 41.250
Unit cell angles90.00, 105.85, 90.00
Refinement procedure
Resolution39.680 - 1.850
R-factor0.2062
Rwork0.203
R-free0.26670
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4r3h
RMSD bond length0.009
RMSD bond angle1.012
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.6801.960
High resolution limit [Å]1.8501.850
Number of reflections257103624
<I/σ(I)>7.14
Completeness [%]97.2
Redundancy3.3
CC(1/2)0.9940.498
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29525% PEG 3350, 0.2M Ammonium Sulphate, 0.1M Bis-Tris pH 6.5

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