7OU3
Crystal structure of Tga-AGOG, an 8-oxoguanine DNA glycosylase from Thermococcus gammatolerans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-09-26 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.97857 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.429, 62.452, 139.877 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.150 - 1.490 |
R-factor | 0.1732 |
Rwork | 0.172 |
R-free | 0.19180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1xqo |
RMSD bond length | 0.005 |
RMSD bond angle | 0.766 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 69.940 | 1.520 |
High resolution limit [Å] | 1.490 | 1.490 |
Rmerge | 0.071 | 0.844 |
Number of reflections | 88713 | 4393 |
<I/σ(I)> | 13.6 | 2.3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.3 | 7.3 |
CC(1/2) | 0.998 | 0.832 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.6 | 293 | Hepes, NaCl, PEG 1500, glycerol |