7OTU
Human OMPD-domain of UMPS in complex with 6-hydroxy-UMP at 0.95 Angstroms resolution, crystal 2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-08-23 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.7653 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 77.893, 116.724, 61.898 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.460 - 0.950 |
R-factor | 0.0966 |
Rwork | 0.096 |
R-free | 0.10620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2qcd |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0258) |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.460 | 42.460 | 0.970 |
High resolution limit [Å] | 0.950 | 4.250 | 0.950 |
Rmerge | 0.052 | 0.021 | 1.448 |
Rmeas | 0.054 | 0.022 | 1.507 |
Total number of observations | 2353528 | ||
Number of reflections | 175866 | 2126 | 12848 |
<I/σ(I)> | 23.58 | 86.81 | 2.34 |
Completeness [%] | 99.7 | 98.7 | 99 |
Redundancy | 13.383 | 11.63 | 12.61 |
CC(1/2) | 1.000 | 1.000 | 0.785 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.8 | 293 | Ammonium sulfate, Tris/HCl, Glutathion, Glycerol |