7MLP
Crystal structure of ricin A chain in complex with 5-(2,6-dimethylphenyl)thiophene-2-carboxylic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-11-18 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 38.658, 77.867, 53.244 |
Unit cell angles | 90.00, 111.25, 90.00 |
Refinement procedure
Resolution | 49.630 - 1.780 |
R-factor | 0.1824 |
Rwork | 0.181 |
R-free | 0.21280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1rtc |
RMSD bond length | 0.006 |
RMSD bond angle | 1.381 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.630 | 1.820 |
High resolution limit [Å] | 1.780 | 1.780 |
Rpim | 0.078 | 0.530 |
Number of reflections | 27293 | 1415 |
<I/σ(I)> | 5.9 | 1.5 |
Completeness [%] | 96.9 | 90.2 |
Redundancy | 3.7 | 3 |
CC(1/2) | 0.990 | 0.620 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 295 | 100 mM Sodium Acetate pH 4.5, 200 mM Zinc Acetate, 10 %(w/v) PEG 3000 |