Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7MJY

MiaB in the complex with s-adenosyl-L-homocysteine and RNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]100
Detector technologyPIXEL
Collection date2018-07-24
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0033
Spacegroup nameP 21 21 21
Unit cell lengths53.834, 79.982, 110.137
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.370 - 1.860
R-factor0.1758
Rwork0.174
R-free0.20880
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2qgq
RMSD bond length0.006
RMSD bond angle1.292
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.890
High resolution limit [Å]1.8605.0501.860
Rmerge0.1520.0640.918
Rmeas0.1630.0691.014
Rpim0.0580.0240.421
Total number of observations303282
Number of reflections4064022241971
<I/σ(I)>4.8
Completeness [%]100.010099.6
Redundancy7.57.55.1
CC(1/2)0.9970.681
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP298100 mM sodium cacodylate, pH 5.5, 13% PEG 4000, and 3% 1,6-hexanediol

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon