7GJB
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with MAT-POS-5d65ec79-2 (Mpro-P0188)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-11 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91199 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.110, 98.000, 102.220 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 56.100 - 2.030 |
R-factor | 0.2351 |
Rwork | 0.233 |
R-free | 0.27350 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.990 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.4 (20-APR-2021)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 56.149 | 2.098 |
High resolution limit [Å] | 1.854 | 1.854 |
Rmerge | 0.245 | 1.155 |
Rmeas | 0.266 | 1.257 |
Rpim | 0.103 | 0.490 |
Total number of observations | 226081 | 11004 |
Number of reflections | 34326 | 1716 |
<I/σ(I)> | 6.9 | 1.6 |
Completeness [%] | 59.2 | |
Redundancy | 6.6 | 6.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 15% PEG 4K, 5% DMSO, 0.1M MES pH 6.5 |