7GH5
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with TRY-UNI-714-12 (Mpro-x2908)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-05-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.913 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 112.857, 52.889, 44.148 |
Unit cell angles | 90.00, 102.67, 90.00 |
Refinement procedure
Resolution | 55.050 - 1.660 |
R-factor | 0.1813 |
Rwork | 0.180 |
R-free | 0.21270 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.990 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3 (20-MAY-2020)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 55.170 | 1.690 |
High resolution limit [Å] | 1.660 | 1.660 |
Rmerge | 0.118 | 1.468 |
Rmeas | 0.138 | 1.789 |
Rpim | 0.071 | 1.003 |
Total number of observations | 102476 | 4192 |
Number of reflections | 29972 | 1471 |
<I/σ(I)> | 5.9 | 0.3 |
Completeness [%] | 99.3 | |
Redundancy | 3.4 | 2.8 |
CC(1/2) | 0.995 | 0.331 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 15% PEG 4K, 5% DMSO, 0.1M MES pH 6.5 |