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7FS8

Structure of liver pyruvate kinase in complex with allosteric modulator 21

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2021-10-15
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.9795
Spacegroup nameC 1 2 1
Unit cell lengths206.748, 112.962, 187.947
Unit cell angles90.00, 92.36, 90.00
Refinement procedure
Resolution187.790 - 2.098
R-factor0.2108
Rwork0.209
R-free0.23770
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle0.910
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.4 (16-JUL-2021))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]103.287103.2872.276
High resolution limit [Å]2.0986.5292.098
Rmerge0.1120.0361.620
Rpim0.0350.0110.510
Total number of observations1891926
Number of reflections17186685918595
<I/σ(I)>12.637.11.6
Completeness [%]94.8
Redundancy1111.111.1
CC(1/2)0.9991.0000.638
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5291100 mM HEPES/MOPS, 10% PEG8000, 20% ethylene glycol, 10 mM phenylalanine, 20 mM sodium oxalate

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