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7FS5

Structure of liver pyruvate kinase in complex with allosteric modulator 17

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2020-10-17
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.97624
Spacegroup nameC 1 2 1
Unit cell lengths209.747, 113.236, 189.399
Unit cell angles90.00, 90.62, 90.00
Refinement procedure
Resolution189.390 - 2.182
R-factor0.21
Rwork0.209
R-free0.23430
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle0.920
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.4 (16-JUL-2021))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]104.867104.8672.303
High resolution limit [Å]2.1826.2062.182
Rmerge0.0950.0301.451
Rpim0.0380.0120.569
Total number of observations1463474
Number of reflections2051601025610260
<I/σ(I)>12.138.81.4
Completeness [%]95.2
Redundancy7.17.17.4
CC(1/2)0.9990.9990.562
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5291100 mM HEPES/MOPS, 10% PEG8000, 20% ethylene glycol, 10 mM phenylalanine, 20 mM sodium oxalate

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