7E97
Oxy-deoxy intermediate of 400 kDa giant hemoglobin at 58% oxygen saturation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2016-06-28 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9800 |
Spacegroup name | H 3 2 |
Unit cell lengths | 111.042, 111.042, 272.415 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.400 - 2.700 |
R-factor | 0.2078 |
Rwork | 0.205 |
R-free | 0.25150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2zfo |
RMSD bond length | 0.003 |
RMSD bond angle | 0.629 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.870 |
High resolution limit [Å] | 2.700 | 2.700 |
Number of reflections | 18081 | 2846 |
<I/σ(I)> | 9 | 1.5 |
Completeness [%] | 99.8 | 99.2 |
Redundancy | 9.7 | 9.4 |
CC(1/2) | 0.998 | 0.583 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 11-12 % (w/v) polyethylene glycol (PEG) 10,000, 10 mM CaCl2, 200 mM Tris-HCl pH 8.0 |