7DTG
Crystal structure of lamin B1 Ig-like domain from human
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2020-08-06 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.979 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 144.647, 160.751, 132.805 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.830 - 3.600 |
R-factor | 0.2258 |
Rwork | 0.222 |
R-free | 0.26220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3umn |
RMSD bond length | 0.002 |
RMSD bond angle | 0.458 |
Data reduction software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.660 |
High resolution limit [Å] | 3.600 | 3.600 |
Rmeas | 0.080 | 0.360 |
Rpim | 0.025 | 0.150 |
Number of reflections | 17863 | 818 |
<I/σ(I)> | 17.95 | 3.3 |
Completeness [%] | 97.1 | 91.1 |
Redundancy | 7.4 | 4.2 |
CC(1/2) | 0.997 | 0.634 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 287.15 | magnesium nitrate, PEG 3350 |