7DHH
The co-crystal structure of DYRK2 with a small molecule inhibitor 19
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 293 |
Detector technology | PIXEL |
Collection date | 2019-04-08 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0000 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 64.984, 128.466, 132.676 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 53.134 - 2.486 |
R-factor | 0.1945 |
Rwork | 0.189 |
R-free | 0.24530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3k2l |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260: ???) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 57.990 | 2.620 |
High resolution limit [Å] | 2.486 | 2.490 |
Rmerge | 0.104 | 1.242 |
Rpim | 0.030 | 0.354 |
Number of reflections | 222264 | 17454 |
<I/σ(I)> | 18.3 | |
Completeness [%] | 87.3 | |
Redundancy | 12.7 | |
CC(1/2) | 0.999 | 0.783 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.36 M-0.5 M sodium citrate tribasic dehydrate, 0.01 M sodium borate, pH 7.5-9.5 |