7DC7
Crystal structure of D12 Fab-ATP complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2018-05-23 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.98000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.962, 68.085, 102.993 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.072 - 1.770 |
R-factor | 0.1788 |
Rwork | 0.177 |
R-free | 0.21990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4nki |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.1) |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3235) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 56.800 | 56.800 | 1.860 |
High resolution limit [Å] | 1.770 | 5.590 | 1.770 |
Rmerge | 0.071 | 0.036 | 0.601 |
Rmeas | 0.077 | 0.039 | 0.650 |
Rpim | 0.030 | 0.016 | 0.245 |
Number of reflections | 40596 | 1548 | 6343 |
<I/σ(I)> | 14.9 | ||
Completeness [%] | 92.0 | 99.8 | 100 |
Redundancy | 6.6 | 5.8 | 6.9 |
CC(1/2) | 0.999 | 0.997 | 0.858 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 294 | 0.1 M HEPES, 32.5 %(w/v) Jeffamine ED-2001 |