7C2M
Crystal structure of mycolic acid transporter MmpL3 from Mycobacterium smegmatis complexed with NITD-349
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NFPSS BEAMLINE BL19U1 |
Synchrotron site | NFPSS |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-21 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.978 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 87.243, 143.625, 143.198 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.400 - 3.100 |
R-factor | 0.2548 |
Rwork | 0.253 |
R-free | 0.28130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ajh |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.400 | 45.400 | 3.180 |
High resolution limit [Å] | 3.100 | 13.850 | 3.100 |
Rmerge | 0.116 | 0.025 | 1.772 |
Rmeas | 0.121 | 0.027 | 1.849 |
Number of reflections | 33226 | 425 | 2408 |
<I/σ(I)> | 17.24 | 69.48 | 1.53 |
Completeness [%] | 99.0 | 96.8 | 97.9 |
Redundancy | 13.159 | 10.461 | 12.308 |
CC(1/2) | 1.000 | 1.000 | 0.657 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 6.5 | 293 | 15% (v/v) polyethylene glycol monomethyl ether 350 (PEGMME 350), 50 mM ADA (N-(2-Acetamido) iminodiacetic acid) (pH 6.5) and 10% (v/v) polyethylene glycol 2000 (PEG2000), protein concentration 5mg/ml, VAPOR DIFFUSION, HANGING DROP, temperature 293K |