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7BB2

Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 at 1.6A resolution (spacegroup P2(1)2(1)2(1))

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsELETTRA BEAMLINE 11.2C
Synchrotron siteELETTRA
Beamline11.2C
Temperature [K]100
Detector technologyPIXEL
Collection date2020-11-25
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9716
Spacegroup nameP 21 21 21
Unit cell lengths67.517, 100.028, 103.753
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution55.960 - 1.600
R-factor0.1654
Rwork0.164
R-free0.18860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7alh
RMSD bond length0.007
RMSD bond angle0.973
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]103.7501.630
High resolution limit [Å]1.6001.600
Rmerge0.096
Number of reflections933014539
<I/σ(I)>15.2
Completeness [%]100.0
Redundancy12.7
CC(1/2)0.9990.615
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52930.1M D-Glucose, 0.1M D-Mannose, 0.1M D-Galactose, 0.1M L-Fucose, 0.1M D-Xylose, 0.1M N-Acetyl-D-Glucosamine, 0.1 M Imidazole/MES monohydrate (acid) pH 6.5, 20% v/v Ethylene glycol, 10 % w/v PEG 8000

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