6VS9
Mycobacterium tuberculosis dihydrofolate reductase in complex with 3-(piperidin-1-ylmethyl)benzoic acid(fragment 11)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-23 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.4 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.014, 70.581, 72.205 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.291 - 1.842 |
R-factor | 0.1812 |
Rwork | 0.180 |
R-free | 0.20770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1df7 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.115 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.27) |
Phasing software | PHASER |
Refinement software | PHENIX (1.14) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.600 | 46.600 | 1.880 |
High resolution limit [Å] | 1.840 | 9.020 | 1.840 |
Rmerge | 0.109 | 0.038 | 1.179 |
Rmeas | 0.114 | 0.040 | 1.247 |
Rpim | 0.032 | 0.012 | 0.394 |
Total number of observations | 337371 | 2853 | 14672 |
Number of reflections | 27501 | 287 | 1544 |
<I/σ(I)> | 17.7 | 52.4 | 2.1 |
Completeness [%] | 99.5 | 99.5 | 93.4 |
Redundancy | 12.3 | 9.9 | 9.5 |
CC(1/2) | 0.999 | 0.999 | 0.749 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 297 | 1.6 M ammonium sulfate, 100 mM MES (2-(N-morpholino) ethanesulfonic acid), pH 6.5, 10 mM CoCl2 |